Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01203 ATGGGAGTGGACTATTACAAACTTCTTCAGGTAGATCGAAGTGCCAGCGATGAGGATCTCAAGAAAGCTTATCGAAGACTTGCTATGAAGTGGCACCCTGATAAGAACCCTAACAATAAAAAGGATGCTGAAGCCAAATTCAAGCAAATCTCTGAAGCTTATGATGTTTTGAGTGATCCACAAAAGAGGGCAGTGTATGATCAGTACGGTGAGGAGGGATTGAAAGGGCAGGTGCCACCTCCGGGTGCTGGTGGATTTTCCGGTGGCAGTGATGGTGGATCAACGACTTTCCGGTTCAATCCTAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGGTTTTCGAGTCCCTTTGGAATGGGGGATATGGGTGGCCGTGCCGGTCCATCTGGCTTTCACAGATTTGGGGATGACATTTTTACTTCTTTTAGTAGGAATGCGGTTGGAGAAGGCTCGGCCAATGTGCCAAGGAAAAGTGCACCTATTGAGAGAACCTTGCAATGCAGTTTGGAGGATTTATACAAAGGGACTACCAAAAAAATGAAGATTTCCAGGGATGTGGTTGATCCTAGTGGGAGGCCCAACACTGTAGAGGAAATTCTAACCATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAACGAACAAAGAGGAGTTACACCAGCTGATCTTGTTTTTATTATTGATGAAAAACCACATGGGGTCTTCAAACGGGATGGCAATGATCTTGTTGTCACACAGAAAATAACCCTTGTTGATGCTCTGACTGGTTACACGGCACAGCTGACAACTCTTGACGGCCGGAATCTCACCGTAACTACCAACTCCATCATCAGTCCGACATACGAGGAAGTGATCAAAGGAGAGGGTATGCCCATTCCCAAGGAACCTTCCAAAAGGGGAAACTTGAGGATCAAGTTCAATATCAAGTTCCCCTCTAGACTTACATCAGAGCAGAAAGCTGGCATTAAACGATTGTTGACATCTCCATAA 1017 0.4494 MGVDYYKLLQVDRSASDEDLKKAYRRLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSGGSDGGSTTFRFNPRSADDIFSEFFGFSSPFGMGDMGGRAGPSGFHRFGDDIFTSFSRNAVGEGSANVPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVVDPSGRPNTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVTPADLVFIIDEKPHGVFKRDGNDLVVTQKITLVDALTGYTAQLTTLDGRNLTVTTNSIISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTSEQKAGIKRLLTSP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01203 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 241 IPR008971 GO:0006457|GO:0051082
Viun10g01203 338 FunFam DnaJ subfamily B member 13 3 122 - -
Viun10g01203 338 CDD DnaJ 4 59 IPR001623 -
Viun10g01203 338 Gene3D - 161 239 - -
Viun10g01203 338 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Viun10g01203 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Viun10g01203 338 SMART dnaj_3 3 62 IPR001623 -
Viun10g01203 338 CDD DnaJ_C 160 323 - -
Viun10g01203 338 SUPERFAMILY Chaperone J-domain 3 97 IPR036869 -
Viun10g01203 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Viun10g01203 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Viun10g01203 338 FunFam DnaJ subfamily B member 13 241 321 - -
Viun10g01203 338 Pfam DnaJ domain 4 67 IPR001623 -
Viun10g01203 338 Gene3D DnaJ domain 3 125 IPR036869 -
Viun10g01203 338 FunFam Dnaj homolog subfamily b member 158 239 - -
Viun10g01203 338 MobiDBLite consensus disorder prediction 72 98 - -
Viun10g01203 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Viun10g01203 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Viun10g01203 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Viun10g01203 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Viun10g01203 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Viun10g01203 338 Gene3D - 241 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01203 Viun-Chr10 22073664 22077635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01203 5 148 C2H2 Transcription Factor Family AT1G74250 29.054 1.44e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01203 K09510 - gmx:100777607 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01337 5 9975075 9977612 Viun10g01203 10 22073664 22077635 PCT