Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01192 ATGGCAACCCAATTGAACCATGTGTTCAGAAGTTCAATTCTGAAGCACAAAACACAATCAGAGACCCCTTTGAGAACCTCACGAAGAACCCCAAGATTTGAAGTGATCAATGCAACAACATCTTCCACCAGAAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCTGTATTGCCCAAAGATGCTTCCTTAGCCATAAACTCGGAGGGTTTTATTCTCCTTGATGTTAGGCCAACATGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTGCACGTGCCTATCTTTGTGGAAGACAAGGATAACAGCCCTATAACTTTACTTAAGAAGTGGGTACATTTTGGATACATTGGGTTGTGGACTGGCCAGTACCTCACTGCTGTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATGTCATTCCTAGTAAGGACACAAAGCTTCTTGTGGCATGCGGAGAAGGATTGAGGTCAATGACAGCAGCTTCAAAACTGTACAATGGAGGTTACAAGAATCTGGGATGGTTGGCTGGTGGGTTTAATCGTTCAAAGGACAATGACTTCCCATCAGCAGAAGGAAAAGAGAAGTTGCAGCATGCTACAATTGGGGGAGTTTCTTACATATTCCTTCAGTTGCTCATATTTCTGAAGGCTGTGGGATAA 663 0.448 MATQLNHVFRSSILKHKTQSETPLRTSRRTPRFEVINATTSSTRSARQLIESGTVRPVLPKDASLAINSEGFILLDVRPTWEREKARVAGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTAVNSEFLSQVENVIPSKDTKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKDNDFPSAEGKEKLQHATIGGVSYIFLQLLIFLKAVG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01192 220 Gene3D - 56 201 IPR036873 -
Viun10g01192 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 52 193 IPR036873 -
Viun10g01192 220 ProSiteProfiles Rhodanese domain profile. 68 192 IPR001763 -
Viun10g01192 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 219 IPR044614 -
Viun10g01192 220 FunFam Rhodanese-like domain-containing protein 10 55 199 - -
Viun10g01192 220 CDD RHOD 62 181 - -
Viun10g01192 220 SMART rhod_4 58 189 IPR001763 -
Viun10g01192 220 Pfam Rhodanese-like domain 60 182 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01192 Viun-Chr10 21828622 21830100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01192 1 207 Sulfurtransferasese or Rhodanese AT3G08920 57.005 6.70e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01192 - - gmx:100795945 384.03