Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01191 ATGGCAACCCAATTGAACCATGTGTTCAGAAGTTCAATTCTGAAGCACAAAACACAATCAGAGACCCCTTTGAGAACCTCACGAAGAACCCCAAGATTTGAAGTGATCAATGCAACAACATCTTCCACCAGAAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCTGTATTGCCCAAAGATGCTTCCTTAGCCATAAACTCGGAGGGTTTTATTCTCCTTGATGTTAGGCCAACATGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTGCACGTGCCTATCTTTGTGGAAGACAAGGATAACAGCCCTATAACTTTACTTAAGAAGTGGGTACATTTTGGATACATTGGGTTGTGGACTGGCCAGTACCTCACTGCTGTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATGTCATTCCTAGTAAGGACACAAAGCTTCTTGTGGCATGCGGAGAAGGATTGAGTTTACAAAATGAAGCAAGCAAGCAGAGGGATTTGATTATGGCTATGAAGGAGAATATTGATTTGTTGGTTTTGGTGAGTGATTCAGGTCAATGA 564 0.4397 MATQLNHVFRSSILKHKTQSETPLRTSRRTPRFEVINATTSSTRSARQLIESGTVRPVLPKDASLAINSEGFILLDVRPTWEREKARVAGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTAVNSEFLSQVENVIPSKDTKLLVACGEGLSLQNEASKQRDLIMAMKENIDLLVLVSDSGQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01191 187 ProSiteProfiles Rhodanese domain profile. 68 157 IPR001763 -
Viun10g01191 187 Gene3D - 56 165 IPR036873 -
Viun10g01191 187 CDD RHOD 62 110 - -
Viun10g01191 187 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 52 158 IPR036873 -
Viun10g01191 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 157 IPR044614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01191 Viun-Chr10 21828622 21830114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01191 4 156 Sulfurtransferasese or Rhodanese AT3G08920 56.209 7.09e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01191 - - gmx:100795945 269.24