Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01179 ATGGAGGTGATGGAGAATGGTGGTGGTGCAAACATGAAGGGGTTGTTGAACAAGGAGATGAGACATGGAAGAACAGCACATAACATGTCATCTTCTTCACTGCGAAAAAAATCCGACCTAACTCTTGTGTCTAAGATTAGTTGTGGTCCTCTAAAAGACATGTTGGTGAACATTCAAGAGGTTGTTTTGGGAACCAAACTCTCTATTCTCTTCCCAGCTGTTCCAATTGCCATTGTTGCTCAATGCTATGGATTTGGAAGACCATGGGTTTTCGCATTGAGCTTATTGGGGCTTACCCCACTTGCAGAAAGACTCAGTTTCTTGACAGAACAAATTGCTTGCTACACTGGTCCCACAGTGGGAGGACTTATGAATGCAACATGTGGGAATAGTACAGAGCTCATTATAGCAATTTTTGCCCTTAGCCATAATAACATTGCTTTGGTCAAATATTCTCTTCTGGGTTCTGTAATTTCTAATCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTGGAGGCCTTGTAAACCTTAGACAGGAACAGAAATATGATAGAAGACAAGCAGATATGAACTTGCTTATGCTGTTTGTGGCATTGCATTGCCACTTGCTGCCAATGTTGTTCCATTATGCTGGTGCCTCAGAAGGTGTCACTGCAGAATCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTATCATGGTGATAGCATATTTTGCCTACCTTGTGTTCCAGCTTTGGACTCACAGAACACTATTTGAAGACCACGATCAAAATGAAGAAGAGGGTGACACTGATTCAGATGAAGCAGTGATAGGATTCTGGAGTGGGTGTGTTTGGCTGGTGGGGATCACTGTGATTATTGCAGTGCTGTCTGAATATGTGGTGGAAACAATTCAGGATGCATCTAATTCATGGGGTATATCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGTAATGCAGCAGAACATGCTGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATTTCTTTGGGTGTTTGTCTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTTTGTGTGATTGTTGCTTGGATTCTGGGAATTCAAATGGACCTCACCTTCAACCTCTTAGAAACAGGTTCACTTGCTTTGGCAATAATAACCACAGCTTTCACATTACAGGATGGAACTTCTCATTACATGAAAGGCCTTGTGCTCTTCCTGTGCTACATTATTATTGGGGCATGCTTTTTCGTACAAAGAACATCCTCTGACCAAATTAATGCTTCTAGCATAATGCTCAAATCAGCAAGGGAAGAAGTTTTCAGAGCTTAA 1338 0.4185 MEVMENGGGANMKGLLNKEMRHGRTAHNMSSSSLRKKSDLTLVSKISCGPLKDMLVNIQEVVLGTKLSILFPAVPIAIVAQCYGFGRPWVFALSLLGLTPLAERLSFLTEQIACYTGPTVGGLMNATCGNSTELIIAIFALSHNNIALVKYSLLGSVISNLLLVLGTSLFCGGLVNLRQEQKYDRRQADMNLLMLFVALHCHLLPMLFHYAGASEGVTAESSLQLSRAASIIMVIAYFAYLVFQLWTHRTLFEDHDQNEEEGDTDSDEAVIGFWSGCVWLVGITVIIAVLSEYVVETIQDASNSWGISVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVCLGSATQISMFVVPLCVIVAWILGIQMDLTFNLLETGSLALAIITTAFTLQDGTSHYMKGLVLFLCYIIIGACFFVQRTSSDQINASSIMLKSAREEVFRA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01179 445 NCBIfam calcium/proton exchanger 52 419 - -
Viun10g01179 445 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 422 IPR004713 GO:0006812|GO:0008324|GO:0016020
Viun10g01179 445 FunFam Vacuolar cation/proton exchanger 264 420 - -
Viun10g01179 445 Gene3D - 263 419 IPR044880 -
Viun10g01179 445 Gene3D - 118 260 IPR044880 -
Viun10g01179 445 Pfam Sodium/calcium exchanger protein 278 414 IPR004837 GO:0016020|GO:0055085
Viun10g01179 445 Pfam Sodium/calcium exchanger protein 89 246 IPR004837 GO:0016020|GO:0055085
Viun10g01179 445 NCBIfam calcium/proton exchanger 72 419 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01179 Viun-Chr10 21675136 21679938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01179 3 428 Antiporters AT2G38170 65.116 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01179 K07300 - gmx:100782052 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01350 5 10183655 10187240 Viun10g01179 10 21675136 21679938 PCT