Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01111 ATGCTCATTTTCCTCCTCAGTCTTCTATTGTTCTTCGTGTTTCTCCTTAGTTTCTTCAACGGAAAACAATATGGCTATCACCGTAACCATGCACATCCTTCACACCCTATCATTGGATGCCTCGTTTCTTTCTACAAGAACCGCCACCGTCTCCTTGACTGGTACACCGAACAAATAGCACAATCCCCGACCCACACCATCGTCGTTCACCGCCTCGGTGCCCGTCGCACGGTGGTGACGGCGAACCCCCGCAACGTAGAGTACATTCTAAAGACCAACTTCGGCAACTTCCCCAAAGGCAAACCCTTCACCGAAATCCTTGGAGACCTTCTCGGGTGCGGGATATTCAACGTCGATGGCGAGCTCTGGCAAGCGCAGCGCAAGCTAGCGAGCCACGAGTTCAGTACGCGGTCCCTTAAGGACTTCATCGTGAAAACGCTCCAGGAAGAGGTCCAACACAGGCTTATTCCACTACTTGAGCAGGCATCACGTGAGAAACACGTGATCGACCTGCAGGATGTGCTGCGGAGACTTACGTTCGATACGGTGTGCAAGGTGTCGCTAGGCTACGATCCATGCTGCCTGGACCTGAAAAGGCCGCTGCCGCCTCTTCTCACAGCTTTCGACACCGCCTCCGAAGTGAGCGCTGCACGCGGCGCAGCGCCAGTGTTTCTGGTTTGGAAGATGAAGAGAATGCTGAACATGGGGTCAGAGAAGGCTCTGAAGGAAGCCGTGAAGCTTGTGCATGAGTCGGTGATGAAGATCATAAAAGGAAAGAAAGATGAAATGACATATAATGAAAGAAAAGGTGGCACCGATTTGCTGGTACGGTTGTTGGAGGCAGGTCAAGAGGAGACGGTGGTGAGGGATATGGTTATAAGCATGATAATGGCGGGGAGAGACACCACATCCGCGGCGATGACCTGGCTGTTCTGGTTGTTGTCGAAACATCGAGAGGAAGAAGCGTTACTAGTGAAAGAGATTTATTGTGGAAATAACCGATGTGAGGGTTTGGATTATGAGTGTTTAAAAGAGATGAAGTTGTTGAAGGCGTGTTTGTGTGAGTCGATGAGGCTGTATCCACCGGTTGCGTGGGACTCGAAGCATGCGAGTGGTGCTGACGTGTTACCTGATGGGACCCACGTGGGGAAAGGGGAAAGGGTGACTTATTTTCCATACGGGATGGGGAGAATGGAGGCTCTGTGGGGGAAGGATTGCTGTGATTTTAAACCACAACGTTGGTTTGATGAAGAGAATGTTGATAATGGGGTTCTGAAGTGTGTGAATCCTTATAAGTTCCCGGTTTTTCAGGCGGGTCCAAGAGTTTGTCTTGGGAGGGAAATGGCTTTTATTCAGATGGAGTATGTGGTGGCTTCTATCCTTAATCGTTTTGTTATTTCGCCGGTCTCTGATGACCACCCGCGTTTTGTTCCTCTTTTAACTGCTCATATGGCTGGAGGATTCAAAGTGAGGATCAACAGCAGAACTGGAGCTGGAACTCAGGAGTGA 1509 0.5023 MLIFLLSLLLFFVFLLSFFNGKQYGYHRNHAHPSHPIIGCLVSFYKNRHRLLDWYTEQIAQSPTHTIVVHRLGARRTVVTANPRNVEYILKTNFGNFPKGKPFTEILGDLLGCGIFNVDGELWQAQRKLASHEFSTRSLKDFIVKTLQEEVQHRLIPLLEQASREKHVIDLQDVLRRLTFDTVCKVSLGYDPCCLDLKRPLPPLLTAFDTASEVSAARGAAPVFLVWKMKRMLNMGSEKALKEAVKLVHESVMKIIKGKKDEMTYNERKGGTDLLVRLLEAGQEETVVRDMVISMIMAGRDTTSAAMTWLFWLLSKHREEEALLVKEIYCGNNRCEGLDYECLKEMKLLKACLCESMRLYPPVAWDSKHASGADVLPDGTHVGKGERVTYFPYGMGRMEALWGKDCCDFKPQRWFDEENVDNGVLKCVNPYKFPVFQAGPRVCLGREMAFIQMEYVVASILNRFVISPVSDDHPRFVPLLTAHMAGGFKVRINSRTGAGTQE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01111 502 Pfam Cytochrome P450 33 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 FunFam Cytochrome P450 24 498 - -
Viun10g01111 502 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS E-class P450 group IV signature 289 315 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PANTHER CYTOCHROME P450 18 490 - -
Viun10g01111 502 CDD CYP86A 66 488 - -
Viun10g01111 502 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01111 502 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01111 Viun-Chr10 19305298 19306806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01111 4 496 Cytochrome P450 AT3G48520 59.192 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01111 K20665 - gmx:100800427 851.277