Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun10g01085 | ATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGCTGGTTCCACTCCCACCTCAAGCCTTCTGTCCTTGAGTCCTCTGACCAAGAAAATGGTGAGAAGAATGAGAGAAAATTGTGGCCCAGTTTTGGTGAGTTCAGTTTGGAGCAACTGAAGACTGCCACAAATGGGTTTTCTTCAGAAAACATAGTGTCTGAACATGGTGAAAAAGCTCCCAATGTTGTATACAAAGCAAAGCTTGATAATGGACAGTGGATCGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCCTAGAGGAAGCCAAACAAGTGGGGAGCCTTAGAAGCGAACGCCTAGCAAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTTCTAGTAGCAGAGTTTATGCCACATGAAACTCTGGCCAAGCATCTTTTTCATTGGGAAGCACAGCCAATGAAGTGGGTCATGAGGTTGAGGGTCGCTTTCTACTTGGCTCAAGCTCTAGAATATTGCACTAGTAAAGGAAGGGGCTTGTATCATGATCTCAATGCCTATAGGATCTTGTTTGATCAAGATGGTAATCCCAGGTTGTCCTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACCCCTCCTGAGTACCTACGGACTGGTAGAGTGACCCCAGAGAGCGTGGTTTACAGTTTTGGAACTCTGCTGCTAGATCTCCTGAGTGGTAAACATATTCCGCCAAGCCACGCACTTGATCTTATTCGTGGCAAAAACTTTCTGATGTTGATGGACTCTGCCTTAGAGGGTCACTTTTCAAAAGATGATGGAACTGAGTTGGTTCGTTTGGCCTCTCGTTGTTTGCAATACGAAGCTCGTGAAAGGCCAAATGTGAAGTCTCTTGTTACGTCTCTTATGTCACTTCAGAAAGAAATAGAGGTCCCCTCGTATGTTTTGATGGGTCTACGGCAAGAAACTGCATCCTCAACGAAGCAATTGTCGTTAACACCTTTTGGTGAAGCTTGTTTGAGACGTGATCTTACTGCAATCCATGAAATATTGGAGAAGACTGGTTACAAGGACGATGAAGGAATTGCGAATGAGCTTTCCTTTCAATTGTGGACAAGCCAAATGCAGGAAACCTTGAATTTGAAGAAGCATGGCGATACTGCTTTTCGAGCTAAAGACTTTGTCACTGCCATTGACTGCTACACTCAATTCATAGAGGGAGGGACCATGGTGTCACCCACGGTGTATGCAAGGAGATGCTTATCTTATTTAATGAATGAGATGGCACAAGAAGCTCTTGGGGATGCCATGCAAGCCCAAGTTGTATCTCCTGAATGGCATACTGCTTTGTATCTTCAAGCAGCTTGTCTTTTTAGCCTTGGAATGGAGAATGATGCTCAAGAGACTCTCAGAGATGGTACTAACATGGAAGCCAGAAAAAACAAAAACTTCAAAATTGTATAG | 1488 | 0.4415 | MGARCSKFSFCWFHSHLKPSVLESSDQENGEKNERKLWPSFGEFSLEQLKTATNGFSSENIVSEHGEKAPNVVYKAKLDNGQWIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWVMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNVKSLVTSLMSLQKEIEVPSYVLMGLRQETASSTKQLSLTPFGEACLRRDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIEGGTMVSPTVYARRCLSYLMNEMAQEALGDAMQAQVVSPEWHTALYLQAACLFSLGMENDAQETLRDGTNMEARKNKNFKIV | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun10g01085 | 495 | Gene3D | Tetratricopeptide repeat domain | 383 | 494 | IPR011990 | GO:0005515 | |
Viun10g01085 | 495 | SUPERFAMILY | TPR-like | 387 | 480 | IPR011990 | GO:0005515 | |
Viun10g01085 | 495 | FunFam | probable serine/threonine-protein kinase At5g41260 | 136 | 327 | - | - | |
Viun10g01085 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 136 | 327 | - | - | |
Viun10g01085 | 495 | ProSiteProfiles | Protein kinase domain profile. | 59 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun10g01085 | 495 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 134 | - | - | |
Viun10g01085 | 495 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 310 | IPR001245 | GO:0004672|GO:0006468 | |
Viun10g01085 | 495 | FunFam | probable serine/threonine-protein kinase At4g35230 | 384 | 493 | - | - | |
Viun10g01085 | 495 | FunFam | probable serine/threonine-protein kinase At4g35230 | 31 | 134 | - | - | |
Viun10g01085 | 495 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 320 | IPR011009 | - | |
Viun10g01085 | 495 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 20 | 490 | IPR045845 | GO:0004672|GO:0009742 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun10g01085 | Viun-Chr10 | 18099957 | 18103579 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun10g01085 | 19 | 322 | Glycoside Hydrolase | AT3G07070 | 33.333 | 3.85e-43 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Viun10g01085 | PK_Tyr_Ser-Thr | 2.1e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun10g01085 | - | - | gmx:100814477 | 966.837 |