Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01048 ATGAGAGCAATTACAGTTGGATTACAATCCCGCGTGGAAGACGTGATGCAAATTATAAACAATAAATCCACGAAAGTATGTATAATAGGGATAGGTGGACGGGAAGGATCTGGCAAAACCACCCTTGCCAAAGCCATCTACAATACAATTCATGGTACATTCATGGAGAAAAGCTTCATTAAAGATATTGCACAAGTTAGTCAAACAAGAGGGCACGTGCCTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGGAAATACGTAGCGTTGAGATGGGAAGTAGAATGATTCGGGAAATACTTTCTGTGAAAAGGATGCTCATTGTACTTGATGATATGATCGAGAAGGGATCTCCATTTTTAGACCTAATAAGGAAAAGTGGTACATGGTTCGGTGCAGGAACTGTAATAATCATGACAACAAAAGAGGAAGGCCTACTGAGCATGCGTGAAGTTGATTTTGTTTTTCGGATAAAGCTAATGAACCCAAACGAGTCCCTTGAGCTCCTTAGTTGGCACGCCTTTAGGGAAGCAAAACCAAAGGAAGAGTACAATGACCTTGCGAAAGGAATAGTTACTCGTTGTCAAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACTAAAGAAGAATGGAATAGAATATTCTTAAAATTAGATAAAATTCCTATGCTTCGTGAAGTTGATGGGATTTTTACAATAAGCTTCGATGGTTTAGGCAATCAAATGGAAAAATATTTATTCCTTGATCTATGTTCTTCCTTTATGGGTAAGGGTAGAGCCTCTGCTACGAATATCCTAAATAACTGTGGATTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAATCTCATACATGTTGAAAGGAACAACAAATTAGGAATGCATCCGTTGCTGCAAAAAATGGGAATGGAAATTATTTTTGACATTCCAAGAAAGGAACCCGAGGTAGTGTGGTTTGATAGGGATGCAGAATACGCACGGTCAGAGAATACGGGGACAAAAGTCATTCATAGATTGCCTGGGAAAATGTTTTTTAGCAGAAGAGATTTCTTCAAACCTTATCCTTTAGAGGTAAGAGACCCATCAAGACTGCTGAAACTTGCTGAAGATTCCGAGTACCTTTCTAAGAAATTGAGAAGGATCAATTTGCAAGGGTTTTCTCAAGAATACATACCTAACGCCTTTTATCTGCATGATGCTATAGTGATTAATTTAAAACACAGTCATCTCCGATTCTTCTGGAAACAACCCCAGGATTTGACGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGATGGAAACCCCTGATTTTTCCAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGTGTGAAGTACACCAATCTATTGGATGTCTCAACAATCTCATACTTCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTCCCTATAGAGATATATAAGTTGAAATCTTTAAAAACTCTAATTCTTTGTGGTTGTTCAAAAGTTGACCTATTGGAAAGAGACATATTGAAAATGGAATCCTTGATAATTCTAATTGCGCAAAATACAACTGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCACAAAGCATTGGATATATATCCCTACGTCGATTTCAGGGATTGTCACATAATCTTTTTCCTTCTATCATTCGGTTTCGGATGCCACCAACATTGAATCCCCAATCTTATATTCATTCTTTCATGAATGTGGAGGATAATATTTGGCATGATATTGCACCATTTCTTAGCAACCTTGCACATCTTCGAAGTGTTTTGGTGCAATATGACGCAGAATTTCAACTATCTAAGCAAGTAAAAGCTATATTGGTCGAATATGGTGTAAATATTACAGAACCAGGAATTTTAAAGCATCAATTCAGGTCCTCTCTGATTGGTGTTGGAAGATACAGAGAACTTTTCAATATGTATCAGGTATTAGCGAGCAGCGAGTTGAGTGATGTTTCTCTCCCAGGTGACAATAATCCTTATTGGTTGGCCCATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCAGGATCGTGTCATGAAGGGAATGGCTTTATCTGTTGTCTATTTATCAACTTCCAAAACAATTGAACCTGAATTCACTTCTGTCTTTATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGACACAGTAATTTCCTTTAATGATGAAGATTGGCATGGAATAATATCAAATTTAGAATCCGGAGACAAGGTGGAGATTTTCGTGACTGTTGTTCACGGATTGGTGGCCAAGAACACAGTTGTCTATTTGATATATGGCGAATCAAATGACTTTGAAAAAGTGCCTGAGCCAAAGAAAAATTCCCTCGTTAGATTCATAAAGAAAATTGCAATTTGA 2448 0.3775 MRAITVGLQSRVEDVMQIINNKSTKVCIIGIGGREGSGKTTLAKAIYNTIHGTFMEKSFIKDIAQVSQTRGHVPLQEQLLSDVLKTKVEIRSVEMGSRMIREILSVKRMLIVLDDMIEKGSPFLDLIRKSGTWFGAGTVIIMTTKEEGLLSMREVDFVFRIKLMNPNESLELLSWHAFREAKPKEEYNDLAKGIVTRCQGLPLALEVIGSYLYERTKEEWNRIFLKLDKIPMLREVDGIFTISFDGLGNQMEKYLFLDLCSSFMGKGRASATNILNNCGLDADSGIRVLIERNLIHVERNNKLGMHPLLQKMGMEIIFDIPRKEPEVVWFDRDAEYARSENTGTKVIHRLPGKMFFSRRDFFKPYPLEVRDPSRLLKLAEDSEYLSKKLRRINLQGFSQEYIPNAFYLHDAIVINLKHSHLRFFWKQPQDLTWLKVLNLSHSKYLMETPDFSRLPSLEQLILKDCPGLCEVHQSIGCLNNLILLNLKDCTSLSNLPIEIYKLKSLKTLILCGCSKVDLLERDILKMESLIILIAQNTTVKQVPFSIVSSQSIGYISLRRFQGLSHNLFPSIIRFRMPPTLNPQSYIHSFMNVEDNIWHDIAPFLSNLAHLRSVLVQYDAEFQLSKQVKAILVEYGVNITEPGILKHQFRSSLIGVGRYRELFNMYQVLASSELSDVSLPGDNNPYWLAHMGEGDSVSFTVPQDRVMKGMALSVVYLSTSKTIEPEFTSVFIVNYTKCTCQIHNHDTVISFNDEDWHGIISNLESGDKVEIFVTVVHGLVAKNTVVYLIYGESNDFEKVPEPKKNSLVRFIKKIAI 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01048 815 Gene3D - 2 158 IPR027417 -
Viun10g01048 815 Pfam NB-ARC domain 11 229 IPR002182 GO:0043531
Viun10g01048 815 Gene3D - 164 248 IPR042197 -
Viun10g01048 815 SUPERFAMILY L domain-like 361 613 - -
Viun10g01048 815 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 536 IPR044974 GO:0006952
Viun10g01048 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 259 IPR027417 -
Viun10g01048 815 Gene3D Ribonuclease Inhibitor 371 542 IPR032675 -
Viun10g01048 815 PRINTS Disease resistance protein signature 28 43 - -
Viun10g01048 815 PRINTS Disease resistance protein signature 103 117 - -
Viun10g01048 815 PRINTS Disease resistance protein signature 198 212 - -
Viun10g01048 815 PRINTS Disease resistance protein signature 500 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01048 Viun-Chr10 17081906 17085327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01048 6 496 WRKY Transcription Factor Family AT5G45050 27.894 3.40e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01048 - - vun:114165123 973