Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01047 ATGGAATTGGCGTCTTCATCATCCAAACTCCAACGGAAGTACGATGTGCTCATCAACTTTAATGGAGAAGACATCCGCAACAAATTTGTTTCTCATCTCGATTCTGTTCTTTCTTCTGCTGGGCTCACCACTTTCCTTCACCACCCGAATTCAGTGCCGCCAATGGATATCCAACAACCTATTCTCGATCTCTGTCGGGTGGCAATTGTTGTTTTCACCAAAACTTATTCTCAATCTGCTTGGTGTCTTCATGAGCTTCAACAAATCATCAAATGGCACCAAACATATTGCCGACATGTTCTGCCAGTATATTACGAAGTCGAGCCATCTGATGTACGTCTTCAGAAGGGTAATTTTGGAAAAGACTTAAAAACGACTGCACAGCAAACATTTTCAGGACAACAACTGGAGGATGGAATTTCCAGGTGGAGCCACGCACTGACGAAAGCAGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTATCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGCGTGGAAGACGTGATGCAAATTATAAACAATAAATCCACGAAAGTATGTATAATAGGGATAGGTGGACGGGAAGGATCTGGCAAAACCACCCTTGCCAAAGCCATCTACAATACAATTCATGGTACATTCATGGAGAAAAGCTTCATTAAAGATATTGCACAAGTTAGTCAAACAAGAGGGCACGTGCCTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGGAAATACGTAGCGTTGAGATGGGAAGTAGAATGATTCGGGAAATACTTTCTGTGAAAAGGATGCTCATTGTACTTGATGATATGATCGAGAAGGGATCTCCATTTTTAGACCTAATAAGGAAAAGTGGTACATGGTTCGGTGCAGGAACTGTAATAATCATGACAACAAAAGAGGAAGGCCTACTGAGCATGCGTGAAGTTGATTTTGTTTTTCGGATAAAGCTAATGAACCCAAACGAGTCCCTTGAGCTCCTTAGTTGGCACGCCTTTAGGGAAGCAAAACCAAAGGAAGAGTACAATGACCTTGCGAAAGGAATAGTTACTCGTTGTCAAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACTAAAGAAGAATGGAATAGAATATTCTTAAAATTAGATAAAATTCCTATGCTTCGTGAAGTTGATGGGATTTTTACAATAAGCTTCGATGGTTTAGGCAATCAAATGGAAAAATATTTATTCCTTGATCTATGTTCTTCCTTTATGGGTAAGGGTAGAGCCTCTGCTACGAATATCCTAAATAACTGTGGATTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAATCTCATACATGTTGAAAGGAACAACAAATTAGGAATGCATCCGTTGCTGCAAAAAATGGGAATGGAAATTATTTTTGACATTCCAAGAAAGGAACCCGAGGTAGTGTGGTTTGATAGGGATGCAGAATACGCACGGTCAGAGAATACGGGGACAAAAGTCATTCATAGATTGCCTGGGAAAATGTTTTTTAGCAGAAGAGATTTCTTCAAACCTTATCCTTTAGAGGTAAGAGACCCATCAAGACTGCTGAAACTTGCTGAAGATTCCGAGTACCTTTCTAAGAAATTGAGAAGGATCAATTTGCAAGGGTTTTCTCAAGAATACATACCTAACGCCTTTTATCTGCATGATGCTATAGTGATTAATTTAAAACACAGTCATCTCCGATTCTTCTGGAAACAACCCCAGGATTTGACGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGATGGAAACCCCTGATTTTTCCAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGTGTGAAGTACACCAATCTATTGGATGTCTCAACAATCTCATACTTCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTCCCTATAGAGATATATAAGTTGAAATCTTTAAAAACTCTAATTCTTTGTGGTTGTTCAAAAGTTGACCTATTGGAAAGAGACATATTGAAAATGGAATCCTTGATAATTCTAATTGCGCAAAATACAACTGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCACAAAGCATTGGATATATATCCCTACGTCGATTTCAGGGATTGTCACATAATCTTTTTCCTTCTATCATTCGGTTTCGGATGCCACCAACATTGAATCCCCAATCTTATATTCATTCTTTCATGAATGTGGAGGATAATATTTGGCATGATATTGCACCATTTCTTAGCAACCTTGCACATCTTCGAAGTGTTTTGGTGCAATATGACGCAGAATTTCAACTATCTAAGCAAGTAAAAGCTATATTGGTCGAATATGGTGTAAATATTACAGAACCAGGAATTTTAAAGCATCAATTCAGGTCCTCTCTGATTGGTGTTGGAAGATACAGAGAACTTTTCAATATGTATCAGGTATTAGCGAGCAGCGAGTTGAGTGATGTTTCTCTCCCAGGTGACAATAATCCTTATTGGTTGGCCCATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCAGGATCGTGTCATGAAGGGAATGGCTTTATCTGTTGTCTATTTATCAACTTCCAAAACAATTGAACCTGAATTCACTTCTGTCTTTATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGACACAGTAATTTCCTTTAATGATGAAGATTGGCATGGAATAATATCAAATTTAGAATCCGGAGACAAGGTGGAGATTTTCGTGACTGTTGTTCACGGATTGGTGGCCAAGAACACAGTTGTCTATTTGATATATGGCGAATCAAATGACTTTGAAAAAGTGCCTGAGCCAAAGAAAAATTCCCTCGTTAGATTCATAAAGAAAATTGCAATTTGA 2994 0.3861 MELASSSSKLQRKYDVLINFNGEDIRNKFVSHLDSVLSSAGLTTFLHHPNSVPPMDIQQPILDLCRVAIVVFTKTYSQSAWCLHELQQIIKWHQTYCRHVLPVYYEVEPSDVRLQKGNFGKDLKTTAQQTFSGQQLEDGISRWSHALTKAANFFGWDESNYRSDAELVDKIVKSVLNLSVLSATKFPVGLQSRVEDVMQIINNKSTKVCIIGIGGREGSGKTTLAKAIYNTIHGTFMEKSFIKDIAQVSQTRGHVPLQEQLLSDVLKTKVEIRSVEMGSRMIREILSVKRMLIVLDDMIEKGSPFLDLIRKSGTWFGAGTVIIMTTKEEGLLSMREVDFVFRIKLMNPNESLELLSWHAFREAKPKEEYNDLAKGIVTRCQGLPLALEVIGSYLYERTKEEWNRIFLKLDKIPMLREVDGIFTISFDGLGNQMEKYLFLDLCSSFMGKGRASATNILNNCGLDADSGIRVLIERNLIHVERNNKLGMHPLLQKMGMEIIFDIPRKEPEVVWFDRDAEYARSENTGTKVIHRLPGKMFFSRRDFFKPYPLEVRDPSRLLKLAEDSEYLSKKLRRINLQGFSQEYIPNAFYLHDAIVINLKHSHLRFFWKQPQDLTWLKVLNLSHSKYLMETPDFSRLPSLEQLILKDCPGLCEVHQSIGCLNNLILLNLKDCTSLSNLPIEIYKLKSLKTLILCGCSKVDLLERDILKMESLIILIAQNTTVKQVPFSIVSSQSIGYISLRRFQGLSHNLFPSIIRFRMPPTLNPQSYIHSFMNVEDNIWHDIAPFLSNLAHLRSVLVQYDAEFQLSKQVKAILVEYGVNITEPGILKHQFRSSLIGVGRYRELFNMYQVLASSELSDVSLPGDNNPYWLAHMGEGDSVSFTVPQDRVMKGMALSVVYLSTSKTIEPEFTSVFIVNYTKCTCQIHNHDTVISFNDEDWHGIISNLESGDKVEIFVTVVHGLVAKNTVVYLIYGESNDFEKVPEPKKNSLVRFIKKIAI 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01047 997 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g01047 997 Gene3D - 174 340 IPR027417 -
Viun10g01047 997 SUPERFAMILY L domain-like 543 795 - -
Viun10g01047 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 717 IPR044974 GO:0006952
Viun10g01047 997 Pfam TIR domain 13 176 IPR000157 GO:0007165
Viun10g01047 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 441 IPR027417 -
Viun10g01047 997 Gene3D - 11 173 IPR035897 -
Viun10g01047 997 Pfam NB-ARC domain 193 411 IPR002182 GO:0043531
Viun10g01047 997 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g01047 997 Gene3D Ribonuclease Inhibitor 554 724 IPR032675 -
Viun10g01047 997 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g01047 997 PRINTS Disease resistance protein signature 210 225 - -
Viun10g01047 997 PRINTS Disease resistance protein signature 380 394 - -
Viun10g01047 997 PRINTS Disease resistance protein signature 682 698 - -
Viun10g01047 997 PRINTS Disease resistance protein signature 285 299 - -
Viun10g01047 997 Gene3D - 346 430 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01047 Viun-Chr10 17081906 17085839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01047 12 763 WRKY Transcription Factor Family AT4G12020 28.463 6.00e-61 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01047 - - vun:114165123 1263.44