Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01043 ATGCAGGGTTTACGAACATTCATAGCATTACCATTCAGAAAGAGTCCATATCAAGCTAATATAGATTGCTACTTAGCTAAAGGTTTGCTCCATGATAATTTGCTGAAGCTAAGGTACTTACGAGTTCTATCTTTGTCACACTACGACAATATCAACCAGTTGCCTGATTCTCTTGAAAAGTTTATTCATTTGAGATATTTGGATGTCTCTCACACTAAAATCAATAGGTTACCAGATGGGACTTGCAAACTGTACAATTTGCAAACCTTGTTGCTGTCATGTTGTTCATATCTACTTGAATTGCCTCAAGACATAGACAAATTGATCAGTCTGCGCCATATGGATCTAAGTGGAACCAAGTTGAAGGAAATGCCCACAAATTTGAGTAAGCTAAAGTGTCTCCAAACTTTGACTTCCTTTGCTGTCAGCAAACAGGAGGATGGATTAAAGGTTGGAGCATTGAAAAATTTTCCACATCTACAAGGAAAACTTTCCATATTAAACCTACAACATGTTGTCAATGCCAATGATGCTTTTCAAGCTAATTTGAAAAAGAAGGAGCTAATTGAGGAGTTAGAATTGGAATGGGCCTGCAACACTGAAGATTCACGTATGGAGAGAGAGGTACTTGAGCAGTTGGAACCATCATCACACTTAAAACAACTAATCATCAAATTTTATGGTGGCACCACATTCCCAAATTGGTTGGGGAATTCTTCCTTTTGCAACATGGTATCCCTTAGAATAAGTGATTGTGATCATTGTTGGTCACTTCCACCACTTGGACAATTACCTTCTTTGAAGCTACTCTCGATTGCTAGGCTCAAATCATTAAAGCATGTTGGAGTTGATTTCTATGGCACAGGCTCTTCTTCTTTTCAACCATTTGCAAGTCTGAAGTATCTAAAATTTATGGAACTGTCATGCTGGGAGGAATGGTCTTCTGCAAGTGATAAAAATACCGAATTTCCTTCTCTTGAAGAGTTGCATATATTACACTGTCCCAAACTAGGAGGAAAATTACCTAGTAATCTTCCATCATTAAGAAGACTTTGGGTAGTTGAATGTGATGTGCTCGAGTTACAAAATTCAAATGTCGTGGATAACACCACTCCTCTGGAAGACACTAAGATTCCTCGGAAAAGTTCATCTGATATTAAGTGGCTCTCTTCTCTTCACTCCATACACATTTTTGGGTCGCCAGGTGTATTGTCATTGCTTAACTACTTTATTTTTGGGAATCAACATTCTCTTAAGCTATTTCCTAGGATTCGGACCAACAATAATTGTCTTCAATTTTTGGATATCAAAAGATTTTCAAATCTCATGTACTTTCAAAACGATGCTCTTCCGTTTTCATTGATGCACCTTCATCTCCAAAATTGTGAGAAGTTAGAATTTCTAAGTCCTGCATTGATACCTAATTTTTCATCACTTGTGTACCTAACTTTAAGTGACAGTTGTCATTCACTGGAATCCTTTCCCTTAGGCAGTTTCCCTGTCCTGGAGAGTCTCTTTATTGACAATTGTCCAAACCTTAAATTCTTCTCCATCTCAGATGACGATTCATCTCAGAACCTGTCACATCTCAAAATCTTTCATGTAACAAATTGTCCTAGGTTGGAATCTTTCCCTTTAGGTGGGTTGCCCACACCCAATCTTCAGAAATTTTATGTTCACAAATGTAAGAACCTCAAGTGTTTGCCAGAACAGATTAACACCCTCACTGGCCTTCAAGAATTGAGCGTTCAAGAGCTTCCAATGCTTCAGTCATTAGCAGAACAGGGTTTGCCTTTCAATTTACGAAAACTTGAGGTCTTTCATTGTTGGGCACTCACAGTAGCATCCATCACTCAGTGGGGTACTCAGTTTCTTAATTTTCTTTTAGAAGTAACAATTGGAGGAGATGATCTTGTAGATGCCTTGATGGAAAAGCAACTGCTTCCAACTTCTCTTGTGTCACTGTGCATCAGAGACATTTCTTTCTTGAATGGTGTGGGTCTTAAGCATCTCATCTCTCTTGAATATCTGCATATTGCAAACTGTATGAACCTTAAGTTGTTGCCCCAAAAGGAATTGCTCCCTCTTTCTCTTTCTGTACTTAGTATCAGTGAATGTCCTCTGTTACAAGACAGCTATCAAAGGAATGGAGGGACGAATTGGCCTAATGTTTCCCATCTTCCATGTGTAAAGATCAATCAAGAAGTAATAATTTGA 2217 0.3834 MQGLRTFIALPFRKSPYQANIDCYLAKGLLHDNLLKLRYLRVLSLSHYDNINQLPDSLEKFIHLRYLDVSHTKINRLPDGTCKLYNLQTLLLSCCSYLLELPQDIDKLISLRHMDLSGTKLKEMPTNLSKLKCLQTLTSFAVSKQEDGLKVGALKNFPHLQGKLSILNLQHVVNANDAFQANLKKKELIEELELEWACNTEDSRMEREVLEQLEPSSHLKQLIIKFYGGTTFPNWLGNSSFCNMVSLRISDCDHCWSLPPLGQLPSLKLLSIARLKSLKHVGVDFYGTGSSSFQPFASLKYLKFMELSCWEEWSSASDKNTEFPSLEELHILHCPKLGGKLPSNLPSLRRLWVVECDVLELQNSNVVDNTTPLEDTKIPRKSSSDIKWLSSLHSIHIFGSPGVLSLLNYFIFGNQHSLKLFPRIRTNNNCLQFLDIKRFSNLMYFQNDALPFSLMHLHLQNCEKLEFLSPALIPNFSSLVYLTLSDSCHSLESFPLGSFPVLESLFIDNCPNLKFFSISDDDSSQNLSHLKIFHVTNCPRLESFPLGGLPTPNLQKFYVHKCKNLKCLPEQINTLTGLQELSVQELPMLQSLAEQGLPFNLRKLEVFHCWALTVASITQWGTQFLNFLLEVTIGGDDLVDALMEKQLLPTSLVSLCIRDISFLNGVGLKHLISLEYLHIANCMNLKLLPQKELLPLSLSVLSISECPLLQDSYQRNGGTNWPNVSHLPCVKINQEVII 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01043 738 Gene3D Ribonuclease Inhibitor 18 375 IPR032675 -
Viun10g01043 738 SMART LRR_typ_2 61 84 IPR003591 -
Viun10g01043 738 SMART LRR_typ_2 108 131 IPR003591 -
Viun10g01043 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 409 714 - -
Viun10g01043 738 Gene3D Ribonuclease Inhibitor 400 733 IPR032675 -
Viun10g01043 738 SUPERFAMILY L domain-like 25 371 - -
Viun10g01043 738 SUPERFAMILY L domain-like 394 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01043 Viun-Chr10 16927540 16929756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01043 51 137 WRKY Transcription Factor Family AT4G12020 35.227 5.20e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01043 - - vun:114165306 1466.44