Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun10g00992 | ATGTCGGATTTGCACTTGGAAATGAAAGAGAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTATTACGTTCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTTTCTCAGCGCATGAACACACCTCTCAACAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCTGGCATCAAGAAAGGATCTCTCACCGAAGAGGAGCAGCGCCTTGTAATCCGGCTTCAAGCAAAATACGGCAACAAATGGAAGAAAATTGCAGCAGAAGTTCCAGGTAGAACTGCCAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAACAAAGAGAGAAGAAAGAACTCAATAGAATCCCTGACCCAATTAACAACAGCAAGTACGAGCACATACTTGAGAGTTTTGCAGAAAAACTAGTAAAGGAACAACATCCTTCACCATCATTTGTTATGTCTGCTTCTGATGGGACATTTCTGCGTACTGATACACCAGCACCTGCATCATCCTTGCTTCCTTCTTGGCTTTCCAATTCAAGTAGTGCTGCTGCTGGTCCAAGTTCCCTTTCTGTGACACTAAGTCTTTCTTCTGCAACAGTTGCTGCAGCTCCATTCTCATGGTTGCAACCTGATAGGGGACAAGACAATGCACCTTTTGCTTTGGGAAATATACCAGCTTTTAGTGAAAATATGCTGATATCTCAGATGGTGGAGCACTGCAAAGAGTTGGAAGAGGGGCAAAGAGCTTTGAGTGCTCACAAGAAGGAGGCAGCTTGGAGGTTAAGCCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCGAGCCGGAGAAGGGAGAAGATGGAAGAGTTTGAAGCAAAGATTAAGGCTCTTCGAGAAGAGGAGAGAGCTGCTTTGAGCAGAATCGAAGCAGAGTACAAAGACGAGTTTGCTGCATTGAAGAGAGACGCCGAAAACAAGGAACAAAAGTTGGCAGAACAATGGGCTGCAAAGCATTTGCAGCTTACTAGGTTGCTAGAGCAGATAGGATGCAGAGCAGGGTTCCTTGAGCCAAATGCAAGATGA | 1074 | 0.4572 | MSDLHLEMKERQRWRAEEDALLRSYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKELNRIPDPINNSKYEHILESFAEKLVKEQHPSPSFVMSASDGTFLRTDTPAPASSLLPSWLSNSSSAAAGPSSLSVTLSLSSATVAAAPFSWLQPDRGQDNAPFALGNIPAFSENMLISQMVEHCKELEEGQRALSAHKKEAAWRLSRVELQLESEKASRRREKMEEFEAKIKALREEERAALSRIEAEYKDEFAALKRDAENKEQKLAEQWAAKHLQLTRLLEQIGCRAGFLEPNAR | 357 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun10g00992 | 357 | CDD | SANT | 70 | 111 | IPR001005 | - | |
Viun10g00992 | 357 | Gene3D | - | 69 | 135 | - | - | |
Viun10g00992 | 357 | PANTHER | PROTEIN ROUGH SHEATH 2 HOMOLOG | 8 | 349 | - | - | |
Viun10g00992 | 357 | Coils | Coil | 277 | 304 | - | - | |
Viun10g00992 | 357 | ProSiteProfiles | Myb-like domain profile. | 61 | 111 | IPR001005 | - | |
Viun10g00992 | 357 | Pfam | Myb-like DNA-binding domain | 14 | 75 | - | - | |
Viun10g00992 | 357 | Gene3D | - | 11 | 65 | - | - | |
Viun10g00992 | 357 | FunFam | MYB-related transcription factor | 11 | 65 | - | - | |
Viun10g00992 | 357 | SUPERFAMILY | Homeodomain-like | 11 | 105 | IPR009057 | - | |
Viun10g00992 | 357 | SMART | sant | 65 | 113 | IPR001005 | - | |
Viun10g00992 | 357 | SMART | sant | 10 | 62 | IPR001005 | - | |
Viun10g00992 | 357 | CDD | SANT | 13 | 60 | IPR001005 | - | |
Viun10g00992 | 357 | Coils | Coil | 306 | 330 | - | - | |
Viun10g00992 | 357 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 6 | 60 | IPR017930 | - | |
Viun10g00992 | 357 | ProSiteProfiles | Myb-like domain profile. | 6 | 60 | IPR001005 | - | |
Viun10g00992 | 357 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 61 | 115 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun10g00992 | Viun-Chr10 | 15442303 | 15446061 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun10g00992 | 8 | 348 | MYB Transcription Factor Family | AT2G37630 | 60.929 | 2.31e-143 | 409 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Viun10g00992 | Myb_DNA-bind_6 | 1.3e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun10g00992 | K09422 | - | gmx:100101908 | 569.311 |