Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00956 ATGGAGATTGATGATAAGATGGACTTCCTCTTGAAGCAATGGAGGGTATTTTGCAAGCCTGTTTGCATGCTAGAGGTTGCATTCTTTGATCCAAGTGGAGACATGGAGATTTCTGATGTGATAGAATTCAACGTGAAGCGTTGTAGGGAGGCACTTTTTAAGGCTGCTGGCATCTCAGGGGGCGCGATCTTGAATTCTTGCGAAGAAATGGAGATTAGTGATGCGATAAAACTCCACATAAAATATTGGAGTGAAGCATTTTCTGAGAAAGCTGGTGCGATTGATTATTTTAGTTTTGATGAGGGAACGATTGATTGTGAGATATCGAACCTCGAGAACCATTGGAGGGAGAAACTTTGTGAAGCTTATGGTATATCAATGGATAAAGACTTACAATGGAGATATGTTTTGAAGATTTGGATGAAGGCACTTTATGGCATCTCAAAAGATGCAGTCTATACACCGAGTGTTCAAAAGCTGAAGGCTTACAATCGGATAGAGAGCCTTGTGAAACATTGGAGGATCGCACTCTCTGAAGCTGTTAGCATCTCGAGGTTGGTAGTTCAGCACTACAGGGGAATAACGGATAATGAGATCAACTACATCGAGAAGCGTGCTAGGGACACATTTCGTGAGGCTGCTGGCATCTCCGCGGTTGTTATCCTCAATTCTAGGAATGAAAGCGAGGCTGTAAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGATAAGACAGAGTTGTTTGTTGCCAACAATCCCGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACAATGTTCTGCTACTTGGGGTATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTCAGGGAAGGAGTTTCCTTGCAGATATTAGGGAGGTTTGGGGACAAGAAGCTGGCCCCATTTGTTTACAAGAACGACTTCTATTTGATATCCACCAAGAAAACAATACAAAGATACATAACATTGAATCAGGAAAAATCATATTAAGAGAAAGACTTCACCGTAAAAGGATACTTCTTATACTTGATGATGTAAATAAGTTACAACAATTAAATGCTTTGTGTGGAAATCATGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGACATACATTTACTTAGAGGGAAAAGAGTTGACCAAGTTTTCGCAATGACAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCAAAAGAAGATTTTATTGAACTTTCAAGAAATGTAGTTGCTTATGCTGGGGGATTGCCACTTGCTCTTGAAGTCCTTGGGTCTTATTTATTTGATATGGAGGTTAAAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAATTCCTAATGATGAAGTACAAGAGAAGTTAAAAATAAGTTATGATGGTTTAAGTGATGATACTGAGAAAGGAATATTTCTTGATATAGCATGTTTCTTCATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCGCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGTCTTGTAACTGTGGATGATAAGAACCGAATTGGAATGCATGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGTAGGCTATGGTTTCATGAGGATGTGCTTGATGTGTTATCAAAAGAAACCGGAACAAAATTTATTGAGGGATTGACTTTGAAGCTACCAAGAAGTAATACAAAATCTCTAAGCACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGCTCCAACTTTCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGATCTTAGATGGCTTTGCTGGGATGGATTTCCTTTTTCCTTCATACCAGCAAGCTTTTATCAAGGAAGTCTAGTTTCTATTGAGTTAGAAAACAGTAAGATTACCATGGTTTGGAAAGGGACTCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAAACTCCAGACTTTCTAAATTTGCCTAATCTTGAAAAGCTTGTATTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACTAAACTTCTACTAATAAACTTTCAAGATTGTATTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCCGGTTGTCTAAAGATTGATAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGATAACACTGCTATAGCAAGGTTGCCTTTTTCAATAGTTAGATCAAAAAGTATTGGATATATCTCACTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCTCCGGTAAATAGTCTCTCTTCTCGTGTTCATACATTCGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGCAGTTCCAATCAGCTATCTTATATATCTGAGGAGTTTCCAAAGCTTCGAAGTCTTTGGATAGAGTGTGGGTCAGATCTTCAACTTTCTCGAGATACAACGAGTATTTTGGATGCCTTAAATGCGACAAATTATGAAGAATCTGAGTCATCTGCAACAGCATCACAAATGCAGAATGTATTTACATTAATTGAATGCAACTCAAGATCAAAATTGTTTGAGAAGACACTTTTAATTCAAATGGGAAGGAGTTGGGAAATCACACATATTCTGAAACAGAGAATTTTACAGAATATGACTACGAGTGATGACGGTCATTGTTTGCTACCTGGAGATTGTTATCCAGATTGGTTAACCTTCAACAGCGAAGGCTCTTCTGTGACTTTTGATATTCCCCAAGTAAATGGGCGTAACTTGAAGACAATGATGTGCCATATCCATTATTCTTCCTCTGACAATATAACATCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGAGCACCATTCAGCTTTATAAGAGACATGCATTAGCGTCGTTTGATGATGAGGAATGGCAGAGAGTACTATCAAACATTGAGGCTGGAAACAAGGTGCAATTTGTTGTTGTTTTCTGGAGCAGATTAACTGTCATCAAGACGTCAATTTATCTTATATACGAGGCAATTAATGAAAAAGAAGAGCACTACCATGCACCAAATATGACTATTCCTAGTTATGAATCTTCATGTGCTGTTGGGTCGATCTCTCCTCCAGTGGAATCCATGGAGGACTTAAGGGGTGCTTCCGTAAAAAGCTTAACTAAACGCTTATTGAATAAATTCTTCTCATGTAAAGGAAAAGTGGAAAAGAAGAAAAATGAAGGTTAA 3450 0.3777 MEIDDKMDFLLKQWRVFCKPVCMLEVAFFDPSGDMEISDVIEFNVKRCREALFKAAGISGGAILNSCEEMEISDAIKLHIKYWSEAFSEKAGAIDYFSFDEGTIDCEISNLENHWREKLCEAYGISMDKDLQWRYVLKIWMKALYGISKDAVYTPSVQKLKAYNRIESLVKHWRIALSEAVSISRLVVQHYRGITDNEINYIEKRARDTFREAAGISAVVILNSRNESEAVKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNNVLLLGVWGMGGIGKTTIAKAIYNKIGRNFQGRSFLADIREVWGQEAGPICLQERLLFDIHQENNTKIHNIESGKIILRERLHRKRILLILDDVNKLQQLNALCGNHEWFGSGSRIIITTRDIHLLRGKRVDQVFAMTGMDVDESIELFSWHAFKQASPKEDFIELSRNVVAYAGGLPLALEVLGSYLFDMEVKEWKIVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVTVDDKNRIGMHDLLRDMGREIIRSKSPMELEERSRLWFHEDVLDVLSKETGTKFIEGLTLKLPRSNTKSLSTKAFMNMKKLRLLQLSGVELVGDFEYLSKDLRWLCWDGFPFSFIPASFYQGSLVSIELENSKITMVWKGTQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVFMDCPRLSEVSYTIGHLTKLLLINFQDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLVADNTAIARLPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVHTFVDMSSLVSLDVQNSSSNQLSYISEEFPKLRSLWIECGSDLQLSRDTTSILDALNATNYEESESSATASQMQNVFTLIECNSRSKLFEKTLLIQMGRSWEITHILKQRILQNMTTSDDGHCLLPGDCYPDWLTFNSEGSSVTFDIPQVNGRNLKTMMCHIHYSSSDNITSDGLKNLLVINHTKSTIQLYKRHALASFDDEEWQRVLSNIEAGNKVQFVVVFWSRLTVIKTSIYLIYEAINEKEEHYHAPNMTIPSYESSCAVGSISPPVESMEDLRGASVKSLTKRLLNKFFSCKGKVEKKKNEG 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00956 1149 SUPERFAMILY "Winged helix" DNA-binding domain 482 589 IPR036390 -
Viun10g00956 1149 Gene3D Ribonuclease Inhibitor 751 899 IPR032675 -
Viun10g00956 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 165 895 IPR044974 GO:0006952
Viun10g00956 1149 SUPERFAMILY L domain-like 601 887 - -
Viun10g00956 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 507 IPR027417 -
Viun10g00956 1149 Gene3D - 413 496 IPR042197 -
Viun10g00956 1149 PRINTS Disease resistance protein signature 447 461 - -
Viun10g00956 1149 PRINTS Disease resistance protein signature 277 292 - -
Viun10g00956 1149 PRINTS Disease resistance protein signature 354 368 - -
Viun10g00956 1149 PRINTS Disease resistance protein signature 756 772 - -
Viun10g00956 1149 Gene3D Ribonuclease Inhibitor 591 750 IPR032675 -
Viun10g00956 1149 Pfam NB-ARC domain 257 484 IPR002182 GO:0043531
Viun10g00956 1149 SMART AAA_5 274 414 IPR003593 GO:0016887
Viun10g00956 1149 Gene3D - 219 406 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00956 Viun-Chr10 13812777 13841657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00956 254 804 WRKY Transcription Factor Family AT5G45050 34.138 1.01e-78 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00956 - - var:108322530 1890.55