Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00951 ATGTTTCCCATGTATGACTCAGATTGCGGTAATGATGAGATGGAAATGGACTTTCTTCGTGACCGGTACGAGGAAATGGACAACAGAAACTTTGAAGTGTTTCTGAGTTTCAGAGGGGAAGACACGCGTGCTTCTTTCACTTCGCATCTCTATGCCGCTCTTCAGAATGCAGGAATCATTGTTTTCAAGGATGACGAGTCACTTCCACGGGGAAAGCAAATTTCACCCTCTCTGCGGCTAGCGATCGAAAACTCTCCAATTTCTATTGTTGTTTTCTCGAAAAATTATGCAGAGTCGCGGTGGTGTTTGAAGGAGTTGGAGAAAATAATGGAGTGCCACAGAACCATAGGGCATGTGGTGCTTCCAGTGTTCTATGACGTTGATCCCTCTGAAGTACGTCATCAACGAGGCGACTTTGGGAAAGCATTTCAACGTCTATTGGGGAAGATTTGGAATGAGGATGAAGAAAAGGAGCTGTATTGGAAGCAGCTTTGGAGGAAGACACTTGGTGAGATTGGTGGATTCTCAGCGGTTGAAACCCTATCTTCCAGGTTTGAAAGGGACATAAGCATGGTATACTGGAAATTTGCACTTGCTCAGACGCCGTCATCTTATGTAGAGTCAAACCCAAGGGATGAAACGGAGATTGCTGATTCAATAAACTTCCTCGTGAAGCAGTGGATGGAGAGAATTTGTATGGGTGCTGAAATCCCATTTAGAGAAATGGAGATCGATGATAAGATAGACTTCCTCGTGAAGCAGTGGGCGGTCGTATTTCCTAAGCCTATTTGCAGGTTTTATCCACGTTTTGAAATGGAGACTGCTGATGCCATAGAATTCCAAGTGAAACATTGTCGGGAGGCACTTTTTAAGGCGGCTGGCATCTCGCGGGGCGCAATCTTGAATTCCCGCCGAGAGATGGAGATTACTGAAGCGATAGAACTCCAATTGAAATATTGGAGGGATGCATTTTCTAAGGAAGCTGGTGGAGTCTTAGATTCCAAAGGTTATGGAAAGAGGGTGGTCGATTCTGAGATACGGAACCTCCAGAATCATTGGAGGGAGAAACTTCTTGAGGCTTATAGTATATTGGAGGATAAACGAGTATATTCCAGTCGAGAAATTCAAATAGAAGCCGACTTGGAGCGTTGGATGAAGGTACTTGTTGAGGCTGCTAACGTCGCGACAGATGCAGTCTATGTATCGTGTATTATAATGCTTAAGGCTTACAATCGCATAGAGAAACTTGTGAACTATTGGAGGATGGCACTCTGTCACGCTATTGGCATCTCGAGCTTTACAGTTCAACAACACAGAGTAATGAAGGATTATGAGATCAACGATATCAAGAAACATAGGGACGCACTTCGTGAGGCTGCTGGCATCTCCGGGGTTGTAATCCTCAATTCTAGGAATGAAAACGAGGCTGTGAAAACTATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACCGAATTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTACTACTTGGGATATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTCAGGGAAGGAGTTTCCTTGCAGATATTAGGGAGGTTTGGGGGCAAGAAGCTGGCCACATTTGTTTACAACAACAACTTCTATTCGATATCCACAAAGAAAACAATACAAAGATACATAACACTGAATCTGGAAAAATGATATTAAGAGAAAGACTTCGCCATAAAAGGATACTTCTTATACTTGATGATGTAAATAAATTACAACAATTAAATGCTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTCGAATAATCATCACAACAAGAGACATACATTTACTTAGAGGAAAAAGAGTTGACCAAGTTTTTGCAATGACAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCCGAAGAAGATTTTATTGAGCTTTCAAGAAACGTAATTGCTTATGCTGGCGGATTGCCACTTGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAATTCCTAACGATGAAGTACAAGAGAAGTTAAAAATAAGTTATGATGGTTTAAGCGATGATACTGAGAAAGGAATATTTCTTGATATAGCATGTTTCTTCATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGTCTTTTCGCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGTCTTGTAATTGTGAATGATAAGAACCAACTTGGAATGCATGATTTGGTACGGGACATGGGAAGGGAAATTATCCGTTCAAAATCACCAATGGAGGTTGAGGAGCGTAGTAGGTTATGGTTTGACGAGGATGTGCTTGATGTGTTATCAAAAGAAACGGGAACAAAATATATTGAGGGATTGAGGTTGAAGTTACCAAGAAGTAATACAAAATCTCTAAGCACTAAGGCTTTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGATGTAGAACTTGTTGGAGATTTTGAATATATTTCCAAAGACCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTTCCTTCATACCAACAAGCTTTTATCAGGGAAGACTAGTTTCTATTGAGTTAGAAAACAGTAAGATTACGATGGTGTGGAAAGAGACTCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAGACTCCTGACTTTCTAAATTTGCCTAATCTTGAAAAGCTTGTACTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACTAAAGTTCTACTGATAAACTTTCAAGATTGTGTTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCCGGTTGTCTAAAGATTGATAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGACAAGACTGGTATAACAAGGGTGCCCTTTTCGATAGTTAGATCAAAAAGTATTGGATATATTTCATTGTGTGGTTATGAAGGATTCTCACGCAATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCGGTAAATAGTCTCTCTTCTCGTGTTCAAACATTTGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGTAGTTCCAATCAGCTATCTTATATATCTGAGGAGCTTCCAAAGCTTCAGAGTCTTTGGATAGAGTGTGGCTCAGATCTTCAACTTTCTAGAGATACAACGAGTATTTTGGAGGCTTTAAATGCGACAAATTCTGTAGAATCTGAGTCATCTGCAACAGCATCACAACTGCATAATGTATTTACATTAATTGAATGCAACTCAGGATCAAAATTGTTTGAGAAGACACTTTTAATTCAAATGGGAAGGAGTTGGGAAATCACACACATCCTGAAACAGAGAATTTTACAGAATATGACTACGAGTGATGGGGGTGATTGTTTGCTACCTGGAGATTGTTATCCAGATTGGTTAACCTTCAGCAGCGAAGGTTCTTCTGTGACTTTTGAAATTGCCCAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATATCCATTATTCTTCTTCTGACAGTATAACATCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGAGCACCATTCAGCTTTTCAAGAGAAATGCATTAGCGTCGTTTGATGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCAGATTAATTGTAATCAAGACGTCAATTTATCTTATATATGAGGCAATTGAGGAAAAAGAAGAGCACTACCATGCACCAAATATGACTATTCCTAGTTATGAATCTTCATGTGCTGTTGGGTCGATCTCTCCTCCAGTGGAATCCATGGAGGACTTAAGGGGTGCTTCTGTAAAAAGCTTAACTAAACGCATATTGAATAAATTCTTCTCATGTAAAGGAAAAGTGGAAAAGAAGAAAAATCAAGGTTAA 4188 0.3957 MFPMYDSDCGNDEMEMDFLRDRYEEMDNRNFEVFLSFRGEDTRASFTSHLYAALQNAGIIVFKDDESLPRGKQISPSLRLAIENSPISIVVFSKNYAESRWCLKELEKIMECHRTIGHVVLPVFYDVDPSEVRHQRGDFGKAFQRLLGKIWNEDEEKELYWKQLWRKTLGEIGGFSAVETLSSRFERDISMVYWKFALAQTPSSYVESNPRDETEIADSINFLVKQWMERICMGAEIPFREMEIDDKIDFLVKQWAVVFPKPICRFYPRFEMETADAIEFQVKHCREALFKAAGISRGAILNSRREMEITEAIELQLKYWRDAFSKEAGGVLDSKGYGKRVVDSEIRNLQNHWREKLLEAYSILEDKRVYSSREIQIEADLERWMKVLVEAANVATDAVYVSCIIMLKAYNRIEKLVNYWRMALCHAIGISSFTVQQHRVMKDYEINDIKKHRDALREAAGISGVVILNSRNENEAVKTIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLLLGIWGMGGIGKTTIAKAIYNKIGRNFQGRSFLADIREVWGQEAGHICLQQQLLFDIHKENNTKIHNTESGKMILRERLRHKRILLILDDVNKLQQLNALCGNREWFGSGSRIIITTRDIHLLRGKRVDQVFAMTGMDVDESIELFSWHAFKQASPEEDFIELSRNVIAYAGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVIVNDKNQLGMHDLVRDMGREIIRSKSPMEVEERSRLWFDEDVLDVLSKETGTKYIEGLRLKLPRSNTKSLSTKAFMNMKKLRLLQLSDVELVGDFEYISKDLRWLCWHGFPFSFIPTSFYQGRLVSIELENSKITMVWKETQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLMDCPRLSEVSYTIGHLTKVLLINFQDCVSLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLVADKTGITRVPFSIVRSKSIGYISLCGYEGFSRNVFPSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSYISEELPKLQSLWIECGSDLQLSRDTTSILEALNATNSVESESSATASQLHNVFTLIECNSGSKLFEKTLLIQMGRSWEITHILKQRILQNMTTSDGGDCLLPGDCYPDWLTFSSEGSSVTFEIAQVNGRNLKTMMCHIHYSSSDSITSDGLKNLLVINHTKSTIQLFKRNALASFDDEEWQRVLSNIEPGNKVQIVVVFWSRLIVIKTSIYLIYEAIEEKEEHYHAPNMTIPSYESSCAVGSISPPVESMEDLRGASVKSLTKRILNKFFSCKGKVEKKKNQG 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00951 1395 Gene3D - 28 207 IPR035897 -
Viun10g00951 1395 SMART till_3 30 172 IPR000157 GO:0007165
Viun10g00951 1395 Gene3D - 496 652 IPR027417 -
Viun10g00951 1395 Pfam NB-ARC domain 503 730 IPR002182 GO:0043531
Viun10g00951 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 753 IPR027417 -
Viun10g00951 1395 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 193 - -
Viun10g00951 1395 PRINTS Disease resistance protein signature 523 538 - -
Viun10g00951 1395 PRINTS Disease resistance protein signature 600 614 - -
Viun10g00951 1395 PRINTS Disease resistance protein signature 1002 1018 - -
Viun10g00951 1395 PRINTS Disease resistance protein signature 693 707 - -
Viun10g00951 1395 SUPERFAMILY L domain-like 799 1126 - -
Viun10g00951 1395 Gene3D Ribonuclease Inhibitor 847 996 IPR032675 -
Viun10g00951 1395 SUPERFAMILY Toll/Interleukin receptor TIR domain 26 173 IPR035897 -
Viun10g00951 1395 SMART AAA_5 520 660 IPR003593 GO:0016887
Viun10g00951 1395 Gene3D - 659 742 IPR042197 -
Viun10g00951 1395 Gene3D - 430 495 IPR035897 -
Viun10g00951 1395 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 434 1142 IPR044974 GO:0006952
Viun10g00951 1395 ProSiteProfiles TIR domain profile. 29 172 IPR000157 GO:0007165
Viun10g00951 1395 Pfam TIR domain 31 167 IPR000157 GO:0007165
Viun10g00951 1395 Gene3D Ribonuclease Inhibitor 997 1152 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00951 Viun-Chr10 13697335 13708936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00951 724 857 WRKY Transcription Factor Family AT5G45050 31.852 9.46e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00951 - - var:108322530 2181.76