Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00950 ATGTTTCCCATGTATGACTCAGATTGCGGTAATGATGAGATGGAAATGGACTTTCTTCGTGACCGGTACGAGGAAATGGACAACAGAAACTTTGAAGTGTTTCTGAGTTTCAGAGGGGAAGACACGCGTGCTTCTTTCACTTCGCATCTCTATGCCGCTCTTCAGAATGCAGGAATCATTGTTTTCAAGGATGACGAGTCACTTCCACGGGGAAAGCAAATTTCACCCTCTCTGCGGCTAGCGATCGAAAACTCTCCAATTTCTATTGTTGTTTTCTCGAAAAATTATGCAGAGTCGCGGTGGTGTTTGAAGGAGTTGGAGAAAATAATGGAGTGCCACAGAACCATAGGGCATGTGGTGCTTCCAGTGTTCTATGACGTTGATCCCTCTGAAGTACGTCATCAACGAGGCGACTTTGGGAAAGCATTTCAACGTCTATTGGGGAAGATTTGGAATGAGGATGAAGAAAAGGAGCTGTATTGGAAGCAGCTTTGGAGGAAGACACTTGGTGAGATTGGTGGATTCTCAGCGGTTGAAACCCTATCTTCCAGGTTTGAAAGGGACATAAGCATGGTATACTGGAAATTTGCACTTGCTCAGACGCCGTCATCTTATGTAGAGTCAAACCCAAGGGATGAAACGGAGATTGCTGATTCAATAAACTTCCTCGTGAAGCAGTGGATGGAGAGAATTTGTATGGGTGCTGAAATCCCATTTAGTTTTGAAATGGAGACTGCTGATGCCATAGAATTCCAAGTGAAACATTGTCGGGAGGCACTTTTTAAGGCGGCTGGCATCTCGCGGGGCGCAATCTTGAATTCCCGCCGAGAGATGGAGATTACTGAAGCGATAGAACTCCAATTGAAATATTGGAGGGATGCATTTTCTAAGGAAGCTGGTGGAGTCTTAGATTCCAAAGGTTATGGAAAGAGGGTGGTCGATTCTGAGATACGGAACCTCCAGAATCATTGGAGGGAGAAACTTCTTGAGGCTTATAGTATATTGGAGGATAAACGAGTATATTCCAGTCGAGAAATTCAAATAGAAGCCGACTTGGAGCGTTGGATGAAGGTACTTGTTGAGGCTGCTAACGTCGCGACAGATGCAGTCTATGTATCGTGTATTATAATGCTTAAGGCTTACAATCGCATAGAGAAACTTGTGAACTATTGGAGGATGGCACTCTGTCACGCTATTGGCATCTCGAGCTTTACAGTTCAACAACACAGAGTAATGAAGGATTATGAGATCAACGATATCAAGAAACATAGGGACGCACTTCGTGAGGCTGCTGGCATCTCCGGGGTTGTAATCCTCAATTCTAGGAATGAAAACGAGGCTGTGAAAACTATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACCGAATTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTACTACTTGGGATATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTCAGGGAAGGAGTTTCCTTGCAGATATTAGGGAGGTTTGGGGGCAAGAAGCTGGCCACATTTGTTTACAACAACAACTTCTATTCGATATCCACAAAGAAAACAATACAAAGATACATAACACTGAATCTGGAAAAATGATATTAAGAGAAAGACTTCGCCATAAAAGGATACTTCTTATACTTGATGATGTAAATAAATTACAACAATTAAATGCTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTCGAATAATCATCACAACAAGAGACATACATTTACTTAGAGGAAAAAGAGTTGACCAAGTTTTTGCAATGACAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCCGAAGAAGATTTTATTGAGCTTTCAAGAAACGTAATTGCTTATGCTGGCGGATTGCCACTTGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAATTCCTAACGATGAAGTACAAGAGAAGTTAAAAATAAGTTATGATGGTTTAAGCGATGATACTGAGAAAGGAATATTTCTTGATATAGCATGTTTCTTCATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGTCTTTTCGCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGTCTTGTAATTGTGAATGATAAGAACCAACTTGGAATGCATGATTTGGTACGGGACATGGGAAGGGAAATTATCCGTTCAAAATCACCAATGGAGGTTGAGGAGCGTAGTAGGTTATGGTTTGACGAGGATGTGCTTGATGTGTTATCAAAAGAAACGGGAACAAAATATATTGAGGGATTGAGGTTGAAGTTACCAAGAAGTAATACAAAATCTCTAAGCACTAAGGCTTTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGATGTAGAACTTGTTGGAGATTTTGAATATATTTCCAAAGACCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTTCCTTCATACCAACAAGCTTTTATCAGGGAAGACTAGTTTCTATTGAGTTAGAAAACAGTAAGATTACGATGGTGTGGAAAGAGACTCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAGACTCCTGACTTTCTAAATTTGCCTAATCTTGAAAAGCTTGTACTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACTAAAGTTCTACTGATAAACTTTCAAGATTGTGTTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCCGGTTGTCTAAAGATTGATAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGACAAGACTGGTATAACAAGGGTGCCCTTTTCGATAGTTAGATCAAAAAGTATTGGATATATTTCATTGTGTGGTTATGAAGGATTCTCACGCAATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCGGTAAATAGTCTCTCTTCTCGTGTTCAAACATTTGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGTAGTTCCAATCAGCTATCTTATATATCTGAGGAGCTTCCAAAGCTTCAGAGTCTTTGGATAGAGTGTGGCTCAGATCTTCAACTTTCTAGAGATACAACGAGTATTTTGGAGGCTTTAAATGCGACAAATTCTGTAGAATCTGAGTCATCTGCAACAGCATCACAACTGCATAATGTATTTACATTAATTGAATGCAACTCAGGATCAAAATTGTTTGAGAAGACACTTTTAATTCAAATGGGAAGGAGTTGGGAAATCACACACATCCTGAAACAGAGAATTTTACAGAATATGACTACGAGTGATGGGGGTGATTGTTTGCTACCTGGAGATTGTTATCCAGATTGGTTAACCTTCAGCAGCGAAGGTTCTTCTGTGACTTTTGAAATTGCCCAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATATCCATTATTCTTCTTCTGACAGTATAACATCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGAGCACCATTCAGCTTTTCAAGAGAAATGCATTAGCGTCGTTTGATGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCAGATTAATTGTAATCAAGACGTCAATTTATCTTATATATGAGGCAATTGAGGAAAAAGAAGAGCACTACCATGCACCAAATATGACTATTCCTAGTTATGAATCTTCATGTGCTGTTGGGTCGATCTCTCCTCCAGTGGAATCCATGGAGGACTTAAGGGGTGCTTCTGTAAAAAGCTTAACTAAACGCATATTGAATAAATTCTTCTCATGTAAAGGAAAAGTGGAAAAGAAGAAAAATCAAGGTTAA 4101 0.3945 MFPMYDSDCGNDEMEMDFLRDRYEEMDNRNFEVFLSFRGEDTRASFTSHLYAALQNAGIIVFKDDESLPRGKQISPSLRLAIENSPISIVVFSKNYAESRWCLKELEKIMECHRTIGHVVLPVFYDVDPSEVRHQRGDFGKAFQRLLGKIWNEDEEKELYWKQLWRKTLGEIGGFSAVETLSSRFERDISMVYWKFALAQTPSSYVESNPRDETEIADSINFLVKQWMERICMGAEIPFSFEMETADAIEFQVKHCREALFKAAGISRGAILNSRREMEITEAIELQLKYWRDAFSKEAGGVLDSKGYGKRVVDSEIRNLQNHWREKLLEAYSILEDKRVYSSREIQIEADLERWMKVLVEAANVATDAVYVSCIIMLKAYNRIEKLVNYWRMALCHAIGISSFTVQQHRVMKDYEINDIKKHRDALREAAGISGVVILNSRNENEAVKTIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLLLGIWGMGGIGKTTIAKAIYNKIGRNFQGRSFLADIREVWGQEAGHICLQQQLLFDIHKENNTKIHNTESGKMILRERLRHKRILLILDDVNKLQQLNALCGNREWFGSGSRIIITTRDIHLLRGKRVDQVFAMTGMDVDESIELFSWHAFKQASPEEDFIELSRNVIAYAGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVIVNDKNQLGMHDLVRDMGREIIRSKSPMEVEERSRLWFDEDVLDVLSKETGTKYIEGLRLKLPRSNTKSLSTKAFMNMKKLRLLQLSDVELVGDFEYISKDLRWLCWHGFPFSFIPTSFYQGRLVSIELENSKITMVWKETQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLMDCPRLSEVSYTIGHLTKVLLINFQDCVSLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLVADKTGITRVPFSIVRSKSIGYISLCGYEGFSRNVFPSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSYISEELPKLQSLWIECGSDLQLSRDTTSILEALNATNSVESESSATASQLHNVFTLIECNSGSKLFEKTLLIQMGRSWEITHILKQRILQNMTTSDGGDCLLPGDCYPDWLTFSSEGSSVTFEIAQVNGRNLKTMMCHIHYSSSDSITSDGLKNLLVINHTKSTIQLFKRNALASFDDEEWQRVLSNIEPGNKVQIVVVFWSRLIVIKTSIYLIYEAIEEKEEHYHAPNMTIPSYESSCAVGSISPPVESMEDLRGASVKSLTKRILNKFFSCKGKVEKKKNQG 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00950 1366 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 193 - -
Viun10g00950 1366 PRINTS Disease resistance protein signature 494 509 - -
Viun10g00950 1366 PRINTS Disease resistance protein signature 973 989 - -
Viun10g00950 1366 PRINTS Disease resistance protein signature 571 585 - -
Viun10g00950 1366 PRINTS Disease resistance protein signature 664 678 - -
Viun10g00950 1366 SMART till_3 30 172 IPR000157 GO:0007165
Viun10g00950 1366 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 405 1113 IPR044974 GO:0006952
Viun10g00950 1366 SUPERFAMILY L domain-like 770 1097 - -
Viun10g00950 1366 Gene3D - 630 713 IPR042197 -
Viun10g00950 1366 Pfam TIR domain 31 167 IPR000157 GO:0007165
Viun10g00950 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 724 IPR027417 -
Viun10g00950 1366 Gene3D - 310 466 IPR035897 -
Viun10g00950 1366 Gene3D - 28 219 IPR035897 -
Viun10g00950 1366 Gene3D - 467 623 IPR027417 -
Viun10g00950 1366 SMART AAA_5 491 631 IPR003593 GO:0016887
Viun10g00950 1366 Pfam NB-ARC domain 474 701 IPR002182 GO:0043531
Viun10g00950 1366 ProSiteProfiles TIR domain profile. 29 172 IPR000157 GO:0007165
Viun10g00950 1366 Gene3D Ribonuclease Inhibitor 806 967 IPR032675 -
Viun10g00950 1366 Gene3D Ribonuclease Inhibitor 968 1132 IPR032675 -
Viun10g00950 1366 SUPERFAMILY Toll/Interleukin receptor TIR domain 26 173 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00950 Viun-Chr10 13697335 13708936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00950 695 828 WRKY Transcription Factor Family AT5G45050 31.852 1.10e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00950 - - var:108322530 2110.49