Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00941 ATGGCTTCTTCGAGTGAAAGAGAAACGTCTTCAGGATCGTTCTCGATTCAAAATTCTGGTTGGGAGGAGGATTCAGAGGCGCAGATGGATGAGAGGGAGAGGAAGAGGAAGAGAATGACATCGAACCAGGAATCATCGAGCAAGTATCGAATGAGGAACCAGAAGCACTTGGAAGATCTGGTTGCAACGGTGGCTATGCTTAAGAATGAGAATCAGCGTATTCTCCAATCAATCAATATCACTAGCAAAAATTACATGAATGCTGAAGCTGAGAAAGTTCTGGAAGCTCAAATAAGTGAGTTGAGGTCTAGGATTTCGAGCATAAGATTTTATGATGTGTTTTTGAGTTTTAGAGGGGAAGATACGCGTGCTTCTTTCGTTTCACATCTCCATGCCTCTCTTCAAAACGCTGGAATCATTGTCTTCAAGGATGATGAGTCACTTCCAAGGGGAGATCAAATCTCATACTCTCTATTCCAAGCAATTGAACAGTCTCGAATTTCGATTGTTGTCTTCTCAAGGAACTATTCACAGTCACCATGGTGTCTGAATGAGTTGGTGAGAATAATGCAGTGTCACAGAACCATAGGGCAGGTGGTACTTCCAGTGTTCTATGGTGTTGATCCCTCCGAAGTTCGAAATCAAACAGGCGAGTTTGGAAGAGCATTTCAAAGGCTTTCGAACAGAATTTTTACAGAAGAGAAGCTCGATGCGATGCGTTGGATGGAGACACTTCACGAAGCTGCTAGCATCTCAGGGATTGTAGTCCTAAATTCCAGGAATGAGAGTGAGGCTATCAAAAGCATTATCGAAAATGTTACACGTTTGTTAGACAAGACAGAGCTGTTCATTGCTGATAATCCAGTCGGAGTAGAATCTCGGGTGCATGACACGATTCAGCTGTGGGATCTAGAAAGATCAAACGATGTTCTATTGCTAGGAATGTGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCCATTTATAACAAGATTGGCCGTAACTTTGAGGGAAGGAGCTTCCTTGCACAAATCAGGGAAGTTTGGGGGAAAGACGGTGGCCAAGTCTGCTTACAAGAACAACTTTTGTTTGATATCAACAAAGAAACAAAAACAAAGATACACAACATTGAATTTGGAAAAAATATATTAATGCAAAGCCTTCACCATAAAAGGGTACTTGTTATACTTGATGATGTGAATAACTTGCACCAATTAAATGCTCTATGTGGAAATCGTGAATGGTTCGGTTTAGGAAGTAGAATCATCATCACAACTAGAGATATGCATATACTGAGAGGGAGTAGAGTTGACAAATTGTACACGATGGAAAGGATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTCGCATGCATTCAAACAAGCAAGTCCTAGAAAAGATTTTGCAAAACTTTCAAGAAGTGTAGTTGCATATTCTGGGGATTGCCACTGTGTGGCTCTTGAAGTTCTTGGGTCCTATTTGTTTGATTTGGAGGTAACAGAGTGGAAGAGTGTACTGGAGAAACTCCATAAAATTCCAAATGATGAAGTGCAGGAGAAGTTAAAAATAAGCTATGATGGTCTAAGTGATAATACTGAAAAAGAAATATTTCTTGATATAGCTTGCTTCTTTATTGGAATGGACAGAAATGATGTCATACATATATTAAATGGTTGTGGACTTTGTGCAGAAAATGGAATACGTGTCCTAACAGAGCGAAGCCTTGTAACTATAGATCATAACAACACGCTTGGTACGCATGATTTGTTACAAGACATGGGAAGAGAAATCATTCGTGGAAAATCACCGAAGGAACCTGAAGAACGTAGCAGATTGTGGTTTCACGAGGACGTGCTTGATGTATTATCAAAAGAAACTGGAACAAAAGCTATTGAGGGATTGGCTTTGATGTTACCAAGAACAAATACAAAATGTTTGAATACTAAATCTTTTAAGAAGATGAAGAAACTTAGGTTACTGCAACTTGCTGGTGTAGATCTTATTGGGGATTATAAATATCTTTCCAAAGATCTGAGATGGATTTGTTGGCGTGAATTTCCTTTAACATCCTTTCCAGCAAATTTCTATCAAGGAAGTCTTGTCTCTGTTGAGTTAGAAAATAGTAATGTTACACATGTTTGGAAAGAAGCCCAGGTGATGGAGAATCTGAAAATTCTCAATTTAAGTCATTCTCATTATTTAACTCATAGTCCAGACTTTTCCAATATGCCTAATCTTGAAAAGCTAGTACTCTTAGATTGTCCAAGGTTGTTAAAGGTTTCCTGGACGATTGGACATCTCAATAAAGTTCTTCACATAAATTTGCAAGATTGTATTAGTCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTCAAAACACTCATTCTTTCAGGTTGTCTAATGATCGATAAGTTGGAAGAGGATATAGAACAGATGGAGTCTTTGACAACTCTTGTTGCTGATAAGACGGCAATCACAAAAATTCCCTTTTCTATTGTAAGATCAAAAAGCATTTCATTTATTTCATTGTGTGGTTATGAAGGGTTCTTACGAGATGTTTTTCCTTCTATCATCTGGTCTTGGATGTCTCCAATGAATAGTCTTTCATCCCATATGCAAAGGTTTGCAGGCATTTCATTTCTTGCATCTTTAGATGTGTCAAATAAAAGTTCCCATCATCTGGCATCTATTTCCAAGGACCTTCCGAAACTTCAAAGTCTCTGGGTAGAGTGTGGCTCAAAACTTCAATTATCTCACGATACGAAAATTATTTTAGATGCTTTAAATGATACAAATTCAGGGAAATCAGAAACAACTGGAACTACATCACAAATGTCAAATATCAATGTTTTTACATTAATTAAATGCAACAGTCAAGTTCACGTATCAAGATCAAATAGATCTCTTTTAATTCAAATGGGAAGGAGTTATGAGGTCTCCTACAATTTAAAAGAGAGCATTTTACAGAATAATCAAGATTGTTTGGTCTCAGATAATTGTTATCCACATTGGCTAGCCTTTGACAGCAACGGTTCTTCTGTGACTTTTGAAATCCCTCAAGTGAATGGTTATAAGATGAAGACAATAATGTGTCATGTCCATTATTCTTCTCCTGCTAATATAACTTCTGATGGTCTTAAAAACTTGTTGGTGATAAATCACACAAAGGACACCATTCAGCTTCATAAAAGAAATGCATTAGCCGTGTTTGAAGATGAGGACTGGGAGAGGGTCATATCAAATATAGAGCCTGGTAACAAAGTGGAAGTTGTTGTTATTTTTGGAAACAGATTAATTGTGAACCAAACTAAAATTTATGTCACATATGAGCCAAATGATAATAAAAGTGAAGTACCATGCACCACGTAA 3387 0.3767 MASSSERETSSGSFSIQNSGWEEDSEAQMDERERKRKRMTSNQESSSKYRMRNQKHLEDLVATVAMLKNENQRILQSINITSKNYMNAEAEKVLEAQISELRSRISSIRFYDVFLSFRGEDTRASFVSHLHASLQNAGIIVFKDDESLPRGDQISYSLFQAIEQSRISIVVFSRNYSQSPWCLNELVRIMQCHRTIGQVVLPVFYGVDPSEVRNQTGEFGRAFQRLSNRIFTEEKLDAMRWMETLHEAASISGIVVLNSRNESEAIKSIIENVTRLLDKTELFIADNPVGVESRVHDTIQLWDLERSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLAQIREVWGKDGGQVCLQEQLLFDINKETKTKIHNIEFGKNILMQSLHHKRVLVILDDVNNLHQLNALCGNREWFGLGSRIIITTRDMHILRGSRVDKLYTMERMDESESIELFSSHAFKQASPRKDFAKLSRSVVAYSGDCHCVALEVLGSYLFDLEVTEWKSVLEKLHKIPNDEVQEKLKISYDGLSDNTEKEIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLTERSLVTIDHNNTLGTHDLLQDMGREIIRGKSPKEPEERSRLWFHEDVLDVLSKETGTKAIEGLALMLPRTNTKCLNTKSFKKMKKLRLLQLAGVDLIGDYKYLSKDLRWICWREFPLTSFPANFYQGSLVSVELENSNVTHVWKEAQVMENLKILNLSHSHYLTHSPDFSNMPNLEKLVLLDCPRLLKVSWTIGHLNKVLHINLQDCISLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDIEQMESLTTLVADKTAITKIPFSIVRSKSISFISLCGYEGFLRDVFPSIIWSWMSPMNSLSSHMQRFAGISFLASLDVSNKSSHHLASISKDLPKLQSLWVECGSKLQLSHDTKIILDALNDTNSGKSETTGTTSQMSNINVFTLIKCNSQVHVSRSNRSLLIQMGRSYEVSYNLKESILQNNQDCLVSDNCYPHWLAFDSNGSSVTFEIPQVNGYKMKTIMCHVHYSSPANITSDGLKNLLVINHTKDTIQLHKRNALAVFEDEDWERVISNIEPGNKVEVVVIFGNRLIVNQTKIYVTYEPNDNKSEVPCTT 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00941 1128 FunFam Disease resistance protein (TIR-NBS-LRR class) 107 279 - -
Viun10g00941 1128 Pfam TIR domain 111 274 IPR000157 GO:0007165
Viun10g00941 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 543 IPR027417 -
Viun10g00941 1128 Gene3D - 447 532 IPR042197 -
Viun10g00941 1128 ProSiteProfiles TIR domain profile. 109 277 IPR000157 GO:0007165
Viun10g00941 1128 MobiDBLite consensus disorder prediction 1 52 - -
Viun10g00941 1128 Gene3D Ribonuclease Inhibitor 638 998 IPR032675 -
Viun10g00941 1128 Gene3D - 106 285 IPR035897 -
Viun10g00941 1128 Pfam NB-ARC domain 305 521 IPR002182 GO:0043531
Viun10g00941 1128 Coils Coil 57 77 - -
Viun10g00941 1128 SUPERFAMILY "Winged helix" DNA-binding domain 518 625 IPR036390 -
Viun10g00941 1128 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 111 949 IPR044974 GO:0006952
Viun10g00941 1128 CDD bZIP_plant_GBF1 35 86 IPR045314 GO:0003700|GO:0006355
Viun10g00941 1128 SUPERFAMILY L domain-like 607 962 - -
Viun10g00941 1128 Gene3D - 289 409 IPR027417 -
Viun10g00941 1128 SUPERFAMILY Toll/Interleukin receptor TIR domain 103 253 IPR035897 -
Viun10g00941 1128 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 37 52 IPR004827 GO:0003700|GO:0006355
Viun10g00941 1128 SMART brlzneu 30 94 IPR004827 GO:0003700|GO:0006355
Viun10g00941 1128 Gene3D - 32 91 - -
Viun10g00941 1128 SUPERFAMILY Leucine zipper domain 34 86 IPR046347 GO:0003700|GO:0006355
Viun10g00941 1128 MobiDBLite consensus disorder prediction 1 23 - -
Viun10g00941 1128 SMART till_3 110 251 IPR000157 GO:0007165
Viun10g00941 1128 MobiDBLite consensus disorder prediction 25 52 - -
Viun10g00941 1128 PRINTS Disease resistance protein signature 312 327 - -
Viun10g00941 1128 PRINTS Disease resistance protein signature 389 403 - -
Viun10g00941 1128 PRINTS Disease resistance protein signature 721 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00941 Viun-Chr10 13269073 13284578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00941 104 838 WRKY Transcription Factor Family AT4G12020 31.481 1.13e-82 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00941 - - vum:124838437 1585.08