Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00939 ATGGCTTCTTCGAGTGAAAGAGAAACATCTTCAGGATCGTCCACGATTCAAAAATCTGGTTCAGAGGAGGATGCAGAGGCGCAGATGGACGAGAGGAAGAGGAAGAGAATGACGTCGAACCAGGAATCAGCGAGGAAGTATCGAATGAGGAAGCAGAAGCACTTGGAAGATCTGGTTTCAACGGTGGCTCAGCTCAAGAATGAGAATCAGCATATTCTGCAATCAATCAATCTCACTAGCCAAAATTACATGAATTTTGAAGCTGAAAACTCAATTCTGAGAGCTGAAATGAGTGAGTTGAGCTCTAGGCTTTCGAACCTAAGATTCTATGATGTGTTTTTGAGTTTCAGAGGGGAAGATACGCGTGCTTCTTTCGTTTCACATCTCCATGCCTCTCTTCAAAACGCTGGAATCATTGTCTTCAAGGATGATGAGTCACTTCCAAGGGGAGATCAAATCTCATACTCTCTATTCCAAGCAATTGAACAGTCTCGAATTTCGATTGTTGTCTTCTCAAGGAACTATTCACAGTCAACATGGTGTCTGAATGAGTTGGTGAGAATAATGCAGTGTCACAGCACCATAGGGCAGGTGGTACTTCCAGTGTTCTATGATGTTGATCCCTCTGAAGTTCGACATCAAACAGGCGAGTTTGGAAGAGCATTTCAAAGCCTTTCGAGCAGAACTTTTACAGAGGTAAGTAAGAAGCGGCGTTGGATGAAGACACTTCGTGAAGCTGCCAGCATCTCAGGTATTGTTGTCCTAAATTCCAGGAATGAGAGTGAGGCTATCAAAAGCATTATTGAAAATGTTACACGTTTGTTAGACAAGACAGAGTTGTTCATTGCTGATAATCCAGTGGGAGTAGAATCCCGGGTGCAAGACACGATTCAGTTGCTAGATCTCAAAAGATCAAACGATGTTCTACTGCTAGGAATGTGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCAATTTATAACAAGATTGGCCGTAATTTTGAGGGAAGGAGCTTCCTTGCACAAATTAGGGATGTTTGGGGGAAAGATGGTGGCCAAGTCTGCTTGCAAGAACAACTTTTGTTTGATATCAACAAAGAAACAAAAACAAAGATACACAATGTTGAATTTGGAAAAAATATATTAATGCAAAGGCTTCACCGTAAAAGGGTACTTCTTATACTTGATGATGTGAATAACTTGCACCAATTAAATGCTCTATGTGGAAATCGTGGATGGTTTGGTTCAGGAAGTAGAATCATCATCACAACTAGAGATATGCATATACTAAGAGGGAGTAGAGTTGACAAATTGTACATGATGGAAAGGATGGATGAAAGCGAATCTGTTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTAGAGAAGATTTTGCTGAACTTTCAAGAAGTGTAATTGCATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAGTGTACTGGAGAAACTCCAGAAAATTCCAAATGATGAAGTGCAGGAGAAGTTAAAAATAAGCTATGATGGTCTAAGTGATAATACTGAAAAAGAAATATTTCTTGATATAGCTTGCTTCTTTATTGGAATGGACCGAAATGATGTCATACATATATTAAATGGCTGTGGACTTTGTGCAGAAAATGGAATACGTGTTTTAACAGAGCGAAGCCTTGTAACTATAGATCATAACAACACGCTTGGTATGCATGATTTGTTACGAGACATGGGAAGAGAAATCATTCGTGGAAAATCACCGAAGGAACCTGAAGAACGTAGCAGATTATGGTTTCTTGAGGACGTGCTTGATGTTTTATCAAAAGAAACTGGAACAAAAGCCATCGAGGGATTGGCTTTGAAGTTACCAAGAACTAATACAAAATCTTTGAATACTAAAGCTTTCAAGAAGATGAAGAAACTTAGGTTACTGCAACTTGCTGGTGTAGATCTTATTGGGGATTATAAATATCTTTCCAAAGATCTGAGATGGCTTTGTTGGCGTGAATTTCCTTTAACATCCTTTCCAGCAAACTTCTATCAAGGAAGTCTTGTTTCTGTTGAGTTAGAAAACAGTAATGTTACACATGTCTGGAAAGAAGCCCAGGTGATGGAGAATCTGAAAATTCTCAATCTAAGTCATTCTCATTGTTTAACTCATAGTCCAGACTTTTCCAATATGCCTAATCTTGAAAAGCTAGTACTCGTAGATTGTCCAAGGTTGTCTAATGATTGA 2283 0.396 MASSSERETSSGSSTIQKSGSEEDAEAQMDERKRKRMTSNQESARKYRMRKQKHLEDLVSTVAQLKNENQHILQSINLTSQNYMNFEAENSILRAEMSELSSRLSNLRFYDVFLSFRGEDTRASFVSHLHASLQNAGIIVFKDDESLPRGDQISYSLFQAIEQSRISIVVFSRNYSQSTWCLNELVRIMQCHSTIGQVVLPVFYDVDPSEVRHQTGEFGRAFQSLSSRTFTEVSKKRRWMKTLREAASISGIVVLNSRNESEAIKSIIENVTRLLDKTELFIADNPVGVESRVQDTIQLLDLKRSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLAQIRDVWGKDGGQVCLQEQLLFDINKETKTKIHNVEFGKNILMQRLHRKRVLLILDDVNNLHQLNALCGNRGWFGSGSRIIITTRDMHILRGSRVDKLYMMERMDESESVELFSWHAFKQASPREDFAELSRSVIAYSGGLPLALEVLGSYLFDMEVTEWKSVLEKLQKIPNDEVQEKLKISYDGLSDNTEKEIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLTERSLVTIDHNNTLGMHDLLRDMGREIIRGKSPKEPEERSRLWFLEDVLDVLSKETGTKAIEGLALKLPRTNTKSLNTKAFKKMKKLRLLQLAGVDLIGDYKYLSKDLRWLCWREFPLTSFPANFYQGSLVSVELENSNVTHVWKEAQVMENLKILNLSHSHCLTHSPDFSNMPNLEKLVLVDCPRLSND 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00939 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 540 IPR027417 -
Viun10g00939 760 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Viun10g00939 760 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Viun10g00939 760 Gene3D - 30 85 - -
Viun10g00939 760 Gene3D - 445 529 IPR042197 -
Viun10g00939 760 MobiDBLite consensus disorder prediction 23 50 - -
Viun10g00939 760 Pfam bZIP transcription factor 32 85 IPR004827 GO:0003700|GO:0006355
Viun10g00939 760 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Viun10g00939 760 FunFam BZIP transcription factor 30 82 - -
Viun10g00939 760 ProSiteProfiles TIR domain profile. 108 275 IPR000157 GO:0007165
Viun10g00939 760 Gene3D - 108 272 IPR035897 -
Viun10g00939 760 SUPERFAMILY Leucine zipper domain 32 85 IPR046347 GO:0003700|GO:0006355
Viun10g00939 760 SUPERFAMILY "Winged helix" DNA-binding domain 515 622 IPR036390 -
Viun10g00939 760 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 110 757 IPR044974 GO:0006952
Viun10g00939 760 Coils Coil 48 75 - -
Viun10g00939 760 SMART till_3 109 249 IPR000157 GO:0007165
Viun10g00939 760 MobiDBLite consensus disorder prediction 1 22 - -
Viun10g00939 760 SUPERFAMILY L domain-like 606 757 - -
Viun10g00939 760 Coils Coil 83 103 - -
Viun10g00939 760 Pfam NB-ARC domain 291 520 IPR002182 GO:0043531
Viun10g00939 760 Pfam TIR domain 110 272 IPR000157 GO:0007165
Viun10g00939 760 Gene3D - 273 439 IPR027417 -
Viun10g00939 760 PRINTS Disease resistance protein signature 480 494 - -
Viun10g00939 760 PRINTS Disease resistance protein signature 718 734 - -
Viun10g00939 760 PRINTS Disease resistance protein signature 310 325 - -
Viun10g00939 760 PRINTS Disease resistance protein signature 387 401 - -
Viun10g00939 760 Gene3D Ribonuclease Inhibitor 625 760 IPR032675 -
Viun10g00939 760 MobiDBLite consensus disorder prediction 1 50 - -
Viun10g00939 760 CDD bZIP_plant_GBF1 33 84 IPR045314 GO:0003700|GO:0006355
Viun10g00939 760 FunFam Disease resistance protein (TIR-NBS-LRR class) 106 277 - -
Viun10g00939 760 SUPERFAMILY Toll/Interleukin receptor TIR domain 101 251 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00939 Viun-Chr10 13222151 13230044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00939 103 754 WRKY Transcription Factor Family AT4G12020 31.204 1.30e-84 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g00939 NB-ARC 6.8e-31 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00939 - - var:108322522 1352.42