Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00937 ATGGCTTCTTCGAGTGAAAGAGAAACATCTTCAGGATCGTCCACGATTCAAAAATCTGGTTCAGAGGAGGATGCAGAGGCGCAGATGGACGAGAGGAAGAGGAAGAGAATGACGTCGAACCAGGAATCAGCGAGGAAGTATCGAATGAGGAAGCAGAAGCACTTGGAAGATCTGGTTTCAACGGTGGCTCAGCTCAAGAATGAGAATCAGCATATTCTGCAATCAATCAATCTCACTAGCCAAAATTACATGAATTTTGAAGCTGAAAACTCAATTCTGAGAGCTGAAATGAGTGAGTTGAGCTCTAGGCTTTCGAACCTAAGATTCTATGATGTGTTTTTGAGTTTCAGAGGGGAAGATACGCGTGCTTCTTTCGTTTCACATCTCCATGCCTCTCTTCAAAACGCTGGAATCATTGTCTTCAAGGATGATGAGTCACTTCCAAGGGGAGATCAAATCTCATACTCTCTATTCCAAGCAATTGAACAGTCTCGAATTTCGATTGTTGTCTTCTCAAGGAACTATTCACAGTCAACATGGTGTCTGAATGAGTTGGTGAGAATAATGCAGTGTCACAGCACCATAGGGCAGGTGGTACTTCCAGTGTTCTATGATGTTGATCCCTCTGAAGTTCGACATCAAACAGGCGAGTTTGGAAGAGCATTTCAAAGCCTTTCGAGCAGAACTTTTACAGAGGTAAGTAAGAAGCGGCGTTGGATGAAGACACTTCGTGAAGCTGCCAGCATCTCAGGTATTGTTGTCCTAAATTCCAGGAATGAGAGTGAGGCTATCAAAAGCATTATTGAAAATGTTACACGTTTGTTAGACAAGACAGAGTTGTTCATTGCTGATAATCCAGTGGGAGTAGAATCCCGGGTGCAAGACACGATTCAGTTGCTAGATCTCAAAAGATCAAACGATGTTCTACTGCTAGGAATGTGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCAATTTATAACAAGATTGGCCGTAATTTTGAGGGAAGGAGCTTCCTTGCACAAATTAGGGATGTTTGGGGGAAAGATGGTGGCCAAGTCTGCTTGCAAGAACAACTTTTGTTTGATATCAACAAAGAAACAAAAACAAAGATACACAATGTTGAATTTGGAAAAAATATATTAATGCAAAGGCTTCACCGTAAAAGGGTACTTCTTATACTTGATGATGTGAATAACTTGCACCAATTAAATGCTCTATGTGGAAATCGTGGATGGTTTGGTTCAGGAAGTAGAATCATCATCACAACTAGAGATATGCATATACTAAGAGGGAGTAGAGTTGACAAATTGTACATGATGGAAAGGATGGATGAAAGCGAATCTGTTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTAGAGAAGATTTTGCTGAACTTTCAAGAAGTGTAATTGCATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAGTGTACTGGAGAAACTCCAGAAAATTCCAAATGATGAAGTGCAGGAGAAGTTAAAAATAAGCTATGATGGTCTAAGTGATAATACTGAAAAAGAAATATTTCTTGATATAGCTTGCTTCTTTATTGGAATGGACCGAAATGATGTCATACATATATTAAATGGCTGTGGACTTTGTGCAGAAAATGGAATACGTGTTTTAACAGAGCGAAGCCTTGTAACTATAGATCATAACAACACGCTTGGTATGCATGATTTGTTACGAGACATGGGAAGAGAAATCATTCGTGGAAAATCACCGAAGGAACCTGAAGAACGTAGCAGATTATGGTTTCTTGAGGACGTGCTTGATGTTTTATCAAAAGAAACTGGAACAAAAGCCATCGAGGGATTGGCTTTGAAGTTACCAAGAACTAATACAAAATCTTTGAATACTAAAGCTTTCAAGAAGATGAAGAAACTTAGGTTACTGCAACTTGCTGGTGTAGATCTTATTGGGGATTATAAATATCTTTCCAAAGATCTGAGATGGCTTTGTTGGCGTGAATTTCCTTTAACATCCTTTCCAGCAAACTTCTATCAAGGAAGTCTTGTTTCTGTTGAGTTAGAAAACAGTAATGTTACACATGTCTGGAAAGAAGCCCAGGTGATGGAGAATCTGAAAATTCTCAATCTAAGTCATTCTCATTGTTTAACTCATAGTCCAGACTTTTCCAATATGCCTAATCTTGAAAAGCTAGTACTCGTAGATTGTCCAAGGTTGTTAAAGATTTCCCGGACCATTGGACATCTCAATAAAGTTCTTCACATAAATTTGCAAGATTGTATTAGTCTTCGTAAACTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCAGGTTGTCTAATGATTGATAAGTTGCAAGAGGACATAGAACAGATGGAGTCTTTGACAACTCTTGTTGCTGATAAGACTGCAATCACAAAAATTCCCTTTTCTATTGCAAGATCAAAAAGCATTGCATATATTTCTTTGTGTGGCTATGAAGGATTCTTACGAGATGTGTTTCCTTCTATCATCTGGTCTTGGATGTCGCCAACGAATAGTCTTTCATCTCATATGCAAAGGTTTGCTGGCATTTCATCTCTTGCTTCTTTAGATGTGCCAAATAACAGTTCCCACCATCTAGCATCTATTTCCAAGGACCTTCCGAAACTTCAAAGTCTTTGGGTAGAGTGTGGCTCAAAACTTCAATTATCCCAAGATACGAAAATTATTTTTGATGCTTTACATGATACAAATTCAGGGGAATCGGAAACAACTGCAACAACATCACAAATGTCAAATATCAATGCTTTCACATTAATTGAATGCAACAGTCAAGTTCACCTATCAGGATCAAATAGATCTCTTTTAATTCAAATGGGAGTGAGTTCTGAGGTATCCTACAATCTAAAGGAGAACATTTTAAAGAATAATCAAGATTGTTTGGTCTCAGATAATTGTTATCCACATTGGCTAGCCTTTGACAGCAACGGTTCTTCTGTGACTTTTGAAATCCCTGAAGTGAATGGTTATAAGATGAAGACAATAATGTGTCATGTCCATTATTCTTCTCCTGCTAATATAACTTCTGATGGCCTTAAAAACTTGTTGGTGATAAATCACACAAAGGGCACCATTCAGCTTCATAAAAGAAATGCATTAGCCGTGTTTGAAGATGAGGACTGGGAGAGGGTCATATCAAATATAGAGCCTGGTAACAAAGTGGAAGTTGTTGTTATTTTTGGAAACAGCTTAATTGTGAACCATACTAAAATTTATGTCACATATGAGCCAAATGATAATAAAAGTGAAGTACCATGCACCACGTAA 3378 0.384 MASSSERETSSGSSTIQKSGSEEDAEAQMDERKRKRMTSNQESARKYRMRKQKHLEDLVSTVAQLKNENQHILQSINLTSQNYMNFEAENSILRAEMSELSSRLSNLRFYDVFLSFRGEDTRASFVSHLHASLQNAGIIVFKDDESLPRGDQISYSLFQAIEQSRISIVVFSRNYSQSTWCLNELVRIMQCHSTIGQVVLPVFYDVDPSEVRHQTGEFGRAFQSLSSRTFTEVSKKRRWMKTLREAASISGIVVLNSRNESEAIKSIIENVTRLLDKTELFIADNPVGVESRVQDTIQLLDLKRSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLAQIRDVWGKDGGQVCLQEQLLFDINKETKTKIHNVEFGKNILMQRLHRKRVLLILDDVNNLHQLNALCGNRGWFGSGSRIIITTRDMHILRGSRVDKLYMMERMDESESVELFSWHAFKQASPREDFAELSRSVIAYSGGLPLALEVLGSYLFDMEVTEWKSVLEKLQKIPNDEVQEKLKISYDGLSDNTEKEIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLTERSLVTIDHNNTLGMHDLLRDMGREIIRGKSPKEPEERSRLWFLEDVLDVLSKETGTKAIEGLALKLPRTNTKSLNTKAFKKMKKLRLLQLAGVDLIGDYKYLSKDLRWLCWREFPLTSFPANFYQGSLVSVELENSNVTHVWKEAQVMENLKILNLSHSHCLTHSPDFSNMPNLEKLVLVDCPRLLKISRTIGHLNKVLHINLQDCISLRKLPRSIYKLKSLKTLILSGCLMIDKLQEDIEQMESLTTLVADKTAITKIPFSIARSKSIAYISLCGYEGFLRDVFPSIIWSWMSPTNSLSSHMQRFAGISSLASLDVPNNSSHHLASISKDLPKLQSLWVECGSKLQLSQDTKIIFDALHDTNSGESETTATTSQMSNINAFTLIECNSQVHLSGSNRSLLIQMGVSSEVSYNLKENILKNNQDCLVSDNCYPHWLAFDSNGSSVTFEIPEVNGYKMKTIMCHVHYSSPANITSDGLKNLLVINHTKGTIQLHKRNALAVFEDEDWERVISNIEPGNKVEVVVIFGNSLIVNHTKIYVTYEPNDNKSEVPCTT 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00937 1125 FunFam Disease resistance protein (TIR-NBS-LRR class) 106 277 - -
Viun10g00937 1125 SUPERFAMILY L domain-like 607 917 - -
Viun10g00937 1125 Gene3D - 30 85 - -
Viun10g00937 1125 Pfam bZIP transcription factor 32 85 IPR004827 GO:0003700|GO:0006355
Viun10g00937 1125 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Viun10g00937 1125 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Viun10g00937 1125 Gene3D Ribonuclease Inhibitor 627 969 IPR032675 -
Viun10g00937 1125 MobiDBLite consensus disorder prediction 23 50 - -
Viun10g00937 1125 Gene3D - 445 529 IPR042197 -
Viun10g00937 1125 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Viun10g00937 1125 ProSiteProfiles TIR domain profile. 108 275 IPR000157 GO:0007165
Viun10g00937 1125 SUPERFAMILY Toll/Interleukin receptor TIR domain 101 251 IPR035897 -
Viun10g00937 1125 PRINTS Disease resistance protein signature 310 325 - -
Viun10g00937 1125 PRINTS Disease resistance protein signature 480 494 - -
Viun10g00937 1125 PRINTS Disease resistance protein signature 387 401 - -
Viun10g00937 1125 PRINTS Disease resistance protein signature 789 805 - -
Viun10g00937 1125 FunFam BZIP transcription factor 30 81 - -
Viun10g00937 1125 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 110 949 IPR044974 GO:0006952
Viun10g00937 1125 Coils Coil 48 75 - -
Viun10g00937 1125 Pfam NB-ARC domain 291 520 IPR002182 GO:0043531
Viun10g00937 1125 SMART till_3 109 249 IPR000157 GO:0007165
Viun10g00937 1125 MobiDBLite consensus disorder prediction 1 22 - -
Viun10g00937 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 540 IPR027417 -
Viun10g00937 1125 Gene3D - 287 404 IPR027417 -
Viun10g00937 1125 Coils Coil 83 103 - -
Viun10g00937 1125 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
Viun10g00937 1125 MobiDBLite consensus disorder prediction 1 50 - -
Viun10g00937 1125 SUPERFAMILY "Winged helix" DNA-binding domain 515 622 IPR036390 -
Viun10g00937 1125 CDD bZIP_plant_GBF1 33 84 IPR045314 GO:0003700|GO:0006355
Viun10g00937 1125 Gene3D - 108 281 IPR035897 -
Viun10g00937 1125 Pfam TIR domain 110 272 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00937 Viun-Chr10 13222123 13233143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00937 720 836 WRKY Transcription Factor Family AT4G12020 34.188 7.89e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g00937 NB-ARC 1.4e-30 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00937 - - vum:124838437 1649.03