Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00931 ATGGCACACAAGCCTTTCAAATTCAATGAGGATATTCTCGAGCAACTGAGAAATGGGACTGCGAAATTCGAGCTTGTTTCTTCCCCTGTTCCTTCAGTTGCTGCTCCTCCGAACAACATCACAAGCTTGTTTGGGATTGGGAATCGTAGCGCTCTCTTTTTCGCTAGAATTGGCTCATCCTTTAGTGGACACTCTCCCGCAATGAAGAAACTTGAGCATTTTTCAGTTCAGAAGGTTACAGGGGATGGGCGATGTCTGTTTCGTGCTCTGGTCAAAGGAATGGCTTACAATAAGGGAACTGTTCTTAATCAACGTGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTATATGTGAAAATGGAGGTGAACGTAATTTATATGAAGAAGCCCTCATTGCCATCACAGTTGATGAACCACTAAATCGTTACTGCAAACGGATTGTACGACCTGATTTCTGGGGAGGAGAATCAGAGCTGTTGGTGCTGTCAAAGTTATGTAAACAGCCAATCATTGTGTACATCCCAGAGTATGAGTTGATGGGATCTCCAACACATCTGCTTACGGAGAGGATTGGACATCTCAAGCGTGGGACTAGATGTTTGTGGATAGTCCAACAACGGCCCGATTGTAGGTCGCTCGATAGACCCAACAAACTTCGTTAG 678 0.444 MAHKPFKFNEDILEQLRNGTAKFELVSSPVPSVAAPPNNITSLFGIGNRSALFFARIGSSFSGHSPAMKKLEHFSVQKVTGDGRCLFRALVKGMAYNKGTVLNQREERENADELRMAVKEAICENGGERNLYEEALIAITVDEPLNRYCKRIVRPDFWGGESELLVLSKLCKQPIIVYIPEYELMGSPTHLLTERIGHLKRGTRCLWIVQQRPDCRSLDRPNKLR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00931 225 Gene3D - 49 205 - -
Viun10g00931 225 Pfam OTU-like cysteine protease 80 182 IPR003323 -
Viun10g00931 225 FunFam Cysteine proteinases superfamily protein 53 196 - -
Viun10g00931 225 Coils Coil 104 124 - -
Viun10g00931 225 SUPERFAMILY Cysteine proteinases 73 182 IPR038765 -
Viun10g00931 225 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 59 183 - -
Viun10g00931 225 ProSiteProfiles OTU domain profile. 74 197 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00931 Viun-Chr10 12949125 12952919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00931 71 178 C2H2 Transcription Factor Family AT1G50670 30.275 8.88e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00931 - - vun:114166084 436.032