Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00890 ATGAAGACGATTTCTATTATCTGTTTCAATTTTGGCATTATTTTTCCGATTGTTCTTGCAGTTTTCGCACGCGTATCATCGCAGCTTGGTTCGAAGGTAGAAGAGCTTCCTGGTTTTGAAGGGCCTCTTCCATTTGAACTGGAAACAGGGTATGTAGGATTGGGAGAAAGAGATGATGATATGCAAGTGTTTTACTACTTTATCAAGTCAGAGAATGATCCTACAAAAGATCCTCTTATGCTTTGGCTAACTGGAGGTCCTGGTTGTTCTTCCTTTTCTGGTCTTGCTTTTCAAATAGGTCCATTGGGATTCAAGACAGAGAAGTACGATGGAAGCGTGCCAAATTTGATCTTGAGGCCACACTCATGGACGAAGGTGTGTAGCATTATTTTTGTGGATTTGCCTTTAGGAACAGGCTTCTCGTATGCCAAAAATCTTACTGCTAATAGAAGGGACTGGAAGTTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTATTTCAAATGAGTTTTACATGGGAGCTGATTCCTATTCTGGCATACCTGGCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATTGGTCTTCAACCACCAATAAATCTCCAGGGATATCTGCTAGGGAACCCAGTAACAACAAGGAAAGAAAAAAATGACCAAATCCCATTTTCTCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTCACTGAAGATAAATTGCAAAGGAGAATATACATATGTAGATTCTACAAATGAGTTGTGTTTAAGAGATCTCAACTACTATGATGAGTTGCTTTCAGGAATCAACACATTCAACATTTTGGATCGCTATTGCAAAGCTGATTCTGCTAAGAAACATGAAGGTCCATGGATAAGATCTCTGACTCAAAACTTTGAGTCTTCTCTTAATTCTCATCTCACAGAGTTAGACACAAGATGCCAAATATATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAATCGCTGCACATTCGACAGGGAACAAAGGGCAAATGGGAACGTTGTTTTACCGGTGATTATGAGTATGAGATCTGTAGTAGCTTCCCGTTTCATGTAAATCTGAGTGCGAAAGGATATCGTTCTTTAATATATAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTCAACTACTCTATTTTACAAGATTGGAGGCCATGGCTTCTAAAAGGCCAAGTTGCAGGATACACAAGAACGTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACACACAGCTCCTGAGTACAAACCTGAAGAAGGTTACGCCATGTTCAGCAGGTGGATAGCTAGTAAGCCTTTGTAA 1407 0.4023 MKTISIICFNFGIIFPIVLAVFARVSSQLGSKVEELPGFEGPLPFELETGYVGLGERDDDMQVFYYFIKSENDPTKDPLMLWLTGGPGCSSFSGLAFQIGPLGFKTEKYDGSVPNLILRPHSWTKVCSIIFVDLPLGTGFSYAKNLTANRRDWKLVHHTHQFLRKWLIDHPEFISNEFYMGADSYSGIPGPAIVQEISKGNEIGLQPPINLQGYLLGNPVTTRKEKNDQIPFSHGMGLISDELYESLKINCKGEYTYVDSTNELCLRDLNYYDELLSGINTFNILDRYCKADSAKKHEGPWIRSLTQNFESSLNSHLTELDTRCQIYGFFLATQWANDESVRKSLHIRQGTKGKWERCFTGDYEYEICSSFPFHVNLSAKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSILQDWRPWLLKGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPEEGYAMFSRWIASKPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00890 468 FunFam Carboxypeptidase 323 467 - -
Viun10g00890 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Viun10g00890 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Viun10g00890 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Viun10g00890 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Viun10g00890 468 FunFam Carboxypeptidase 370 465 - -
Viun10g00890 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 452 IPR001563 GO:0004185|GO:0006508
Viun10g00890 468 Gene3D alpha/beta hydrolase 31 467 IPR029058 -
Viun10g00890 468 FunFam Serine carboxypeptidase-like 11 27 468 - -
Viun10g00890 468 SUPERFAMILY alpha/beta-Hydrolases 33 467 IPR029058 -
Viun10g00890 468 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00890 Viun-Chr10 12145050 12151445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00890 24 56 Calmodulin-binding Proteins AT2G22960 63.636 4.01e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00890 K16296 - gmx:100780069 813.913