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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun10g00884
ATGTTGAGCCGCGCGTCAAATGTTTCGGCCGAAGCAGTGGTTGGTTCTGGTGATGGTGAGGATGAGCTGTATGAACAGCTCTGGAAGGCTTGTGCGGGACCACTGGTGGATGTTCCTCGTGTTGGCCAGAGAGTGTTCTATTTTCCACAAGGCCACATGGAGCAATTAGAGGCTTCAACCAACCAGGAATTGAATCAGAGGATTCCTCTGCTGCACCTTCCAACGAAGATCCTTTGTCGCGTCGTGAACGTTCATTTACTGGCTGAGCAAGAAACGGATGAGGTTTATGCGCAGATCACTTTGGTGCCGGAATCTAATCAAGATGAGCCTACAAGTCCTGATCCGTGCACTGCTGAACCTACAAGGGCACCGGCTCACTCGTTCTGCAAGGTCTTGACTGCCTCTGATACTAGCACCCATGGTGGCTTCTCTGTTCTCAGGAAACATGCCACTGAGTGCCTTCCTGCATTGGATATGTCCCAACCAACACCAACCCAGGAATTGGTTGCAAAGGATCTTCATGGTTATGAATGGCGGTTTAAGCATATATTTAGAGGTCAGCCACGCAGACACTTGCTTACAACTGGATGGAGTACTTTTGTGACTTCCAAAAGATTAGTTGCCGGGGATACCTTTGTGTTCTTGAGAGGGGACAATGGGGAATTACGTGTCGGAGTGAGACGTCTAGCTCGCCAGGCAAGTAGCATGCCTTCGTCTGTGATTTCCAGTCAAAGCATGCACCTGGGAGTTCTTGCAACTGCCTCTCATGCTGTTGCAACTCAGACTCTTTTTGTGGTATATTATAAGCCAAGGACGAGCCAGTTCATCATTGGAGTGAACAAGTATTTGGAGGCTGTGAGCACGAAGTTTGGTGTTGGCATGAGGTTTAAGATGAGATTCGAGGGGGATGATTCTGCTGAGACTGACAAAAGATTTTCGGGTACCATAGTTGGAATTGAAGATATTTCTCCTCATTGGGAAAATTCAAAATGGCGATCGCTCAAGGTTCAATGGGATGAACTTGCAGCTGTTCCAAGACCTGAGAGGGTTTCACCATGGGAAATAGAGCCATTTGTAGCTTCTGCTTCTACACCCTCAGTTCAACCCACTATTGTGAAGACTAAAAGGCCCCGACCATCCAGCGAGGTTCCAGATGTTGATGCAACATCCGCTGCTTCTGTTTTCTGGGATACTGATATGCCACAGCCTGATACGACACAAATCAATGTTTTGGCCGAAAGCAAACACAATGACAATACTGGTACATGGCATCATATGCAAACTGACATGAATAGTAAAAGCAACAGCAACAACACTATGTTAAGGAATCAGACCGAAGGAAGTTGGCTCTCGTCTCCCCATTCAAGTTGTCCATCTCATTTGTTTCAAGACACAACAGATGATAGCAAGAGCGTCTCAGCTTGGCCTGTTTCAAAGCCTCATCCTTCCAGATTGAACAATGAGCACGTGCTTGACCAAGTTGACAAGGAGAGCAAAGTTGAGACTGCTACAAGTTATCGGTTGTTTGGAATTGATCTTATTGATCATTCTAGGAACACACCTGCTGTAGAGAAGGCATCTCCGCATGCAGTGAATGTTCCCAAAGTTACTACTGAAGGATGCACTAGCACCTTGTCCCAAACAGATGGTGGCCATATGTCGGAGGTACCAAAGGCTTCTTCCAAGGAGAGGAAACAAGAACAGCAACAAGTGTCTCCGAAGGAGAGTCAGAGCAAGCAAATTTCTAGAAGTCGCACCAAGGTTCAAATGCAGGGTGTTGCAGTGGGTCGTGCTGTAGATTTAGCAATGTTGGATGGGTATGATCAACTTATAAATGAATTAGAGGAGATGTTTGACATAAAGGGACAGCTTCAACACAGGAATAAGTGGGAAATTGTCTTCACTGATGATGAAGGTGACATGATGCTTGTGGGAGATGATCCATGGCCTGAATTCTGTAGTATGGTGAGAAGAATCTTCATTTGCTCCAGTCAGGATGTGAAGAAGATGAACTGTGGAAGCAAACTGCCAATCTCTTCGGTGGAAGATGGGACTGTAATAAGCTCAGATACAACTGAAACCTGA
2085
0.4624
MLSRASNVSAEAVVGSGDGEDELYEQLWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLHLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDEPTSPDPCTAEPTRAPAHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIIGVNKYLEAVSTKFGVGMRFKMRFEGDDSAETDKRFSGTIVGIEDISPHWENSKWRSLKVQWDELAAVPRPERVSPWEIEPFVASASTPSVQPTIVKTKRPRPSSEVPDVDATSAASVFWDTDMPQPDTTQINVLAESKHNDNTGTWHHMQTDMNSKSNSNNTMLRNQTEGSWLSSPHSSCPSHLFQDTTDDSKSVSAWPVSKPHPSRLNNEHVLDQVDKESKVETATSYRLFGIDLIDHSRNTPAVEKASPHAVNVPKVTTEGCTSTLSQTDGGHMSEVPKASSKERKQEQQQVSPKESQSKQISRSRTKVQMQGVAVGRAVDLAMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCSMVRRIFICSSQDVKKMNCGSKLPISSVEDGTVISSDTTET
694
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun10g00884
694
Pfam
Auxin response factor
254
335
IPR010525
GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun10g00884
694
MobiDBLite
consensus disorder prediction
556
570
-
-
Viun10g00884
694
PANTHER
AUXIN RESPONSE FACTOR 4-RELATED
22
671
IPR044835
GO:0003677|GO:0006355|GO:0009725
Viun10g00884
694
MobiDBLite
consensus disorder prediction
430
473
-
-
Viun10g00884
694
CDD
B3_DNA
126
228
IPR003340
GO:0003677
Viun10g00884
694
Pfam
B3 DNA binding domain
128
228
IPR003340
GO:0003677
Viun10g00884
694
Gene3D
-
578
671
-
-
Viun10g00884
694
Gene3D
-
125
229
IPR015300
-
Viun10g00884
694
ProSiteProfiles
PB1 domain profile.
583
664
IPR000270
GO:0005515
Viun10g00884
694
MobiDBLite
consensus disorder prediction
571
587
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun10g00884
Viun-Chr10
12103205
12107840
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun10g00884
19
676
B3 DNA Binding Superfamily
AT4G23980
58.912
0.0
717
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3-ARF
Viun10g00884
AUX_IAA
1e-11
CL0072
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun10g00884
K14486
-
gmx:100779003
1254.58
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