Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00841 ATGGGCAACCACGTCGTAAAAGGGTGCCTCTGCTCCGCCGGCGCCGGAGATATCTCCCGCCGGTACCACCATAGCAATGCCAACCCCTTCGGAAACTCAATATGTTACGTTCGACCGCCGGACCTTTTCTCCACCGATAACGTCACTACGATCACAACCTTCCGATCAGTTTCCGGCGCTTCCGTCAGCGCTAACTCCTCCACCCCGCCTTCCACCACCTTCGATTCTCTCCACCACAGCGCAACCAATTCCCCCGTCGTGTTGGACTCCTCGGCGTCGTTTGAGAGCTCCCCATCGTTCACGTCGATGCCTCTGCAGCAACAACACGCTTCGTGTCGTGATGGATCCTTTGGGGGAAGCTGCAACCCCGTTTGGTGCAGCCCAATGGAGAGAGGGTTCTCTTCGGGCCCCGTGGTGCTTGGCGCTTTGATGAATGAAAGAGATTTGAAGAAGAAGCTGCGGAGAAGATTCTCTCATGACAATGGGTTTGCGTTTGAGGACAAAAGTAAGAAGCAAAGCGTGAGGAAGATTCTCAAGAGGGTGATTTCTGGGTCCTTTGTTAAAAGGGTGGTTTCCATTGGAGGGTACAAGAAAAAGAAAGAAAATGACATTGTTAAAGTTGACGGCGATGATGACGGTGGTGGTGGTGACGATGATAAGAATTCTGATGATCATCCTTCTTTAGATGATAATGATGATGATCATCATCATCCTTATTTGAGTGATGATAACGAGAAGTTTAACGTTGTTGGAAGTTGTTGCAGTGACTTTAAAAATCAAGACTTTATGGCGTCGGTTACGGTTGCAGACCGTGAATTGATGGGATGTGAGAATCTAGAATGGGCTGAAGGGAGAGCAGGTGAGGATCGTGTGCATATTGTGATTTCTGAGGAGCATGGGTGGGTTTTTGTAGGAATTTATGATGGGTTCAATGGTCCTGATGCTACTGATTATCTTCTTGATAATCTTTTCCATTCTGTGCATGATGAGCTCAAGGGCATGCTATGTGGCGACACGTCGGAGAAAGTGTTGTTAGGTTTGGTTAATGGTAGTGGTAGGTCCTCCAAAATAAGGAACACAGTGGTCAAAGGTTGTTGTTCTTCGATGTTGGATAACTGGGATTCTTTGAATTGTTGGAAGAAATTGGAGTTAAGCGTGAAAGGGGCATCAAGTTTTGGGCATTCAGATGCGTTGGTTGGTCTTTCTGAGGCGTTGAGGAAGACGGAGGATGCGTTTCTGAAGAAAGTTGATGAAGTGATTGGTAATAATCCTGTGTTGACTATGATGGGGTCTTGTGTTTTGGTGATGCTGATGAAGGGAGAAGATGTTTACTTGATGAATGTGGGAGACAGTCGTGCAATATTGGCTGATCACAGTGTTAATTCTCTTCAGCTCACCATGGAGCACAGTACCCTTGTCAAAGAGGAGGTTGACAGAATCATGAAGGAGCACCCAGATGACCCTTGTGCAATTACTAAAGGAAGGGTGAAAGGTTACTTAAATGTTACAAGAGCTTTTGGTGCTGGCTTCCTGAAGGAGCCTAAACAGAATAATGCAGTATTAGAGAGTCTGAAAGTTAACTACATAGGGGAATCCCCATACATCGTATGTTCTCCTTCACTTTACCACCACAGGCTGAGGCCAAGTGACAGATTCTTGATATTGTGTTCTGATGGACTCCAACAATACTTCACAAACGAAGAAGCAGTTGCCATAGTGGACTCGTTCATCACTTCCTCTCCAGATACAGATCCTGCACAACTCCTTATAAATGAAGCACTATTTCGGGCAGCCAAAAAAGCTGGTATGGACTTCCATGAATTGCTGAATATCCCACACGGGGAACGACGTCTTTATCATGATGACATTTCTATAGTAATAATCTCCTTCAAGGGAAAAATATGGCGTTCATCACTTTAA 1920 0.4583 MGNHVVKGCLCSAGAGDISRRYHHSNANPFGNSICYVRPPDLFSTDNVTTITTFRSVSGASVSANSSTPPSTTFDSLHHSATNSPVVLDSSASFESSPSFTSMPLQQQHASCRDGSFGGSCNPVWCSPMERGFSSGPVVLGALMNERDLKKKLRRRFSHDNGFAFEDKSKKQSVRKILKRVISGSFVKRVVSIGGYKKKKENDIVKVDGDDDGGGGDDDKNSDDHPSLDDNDDDHHHPYLSDDNEKFNVVGSCCSDFKNQDFMASVTVADRELMGCENLEWAEGRAGEDRVHIVISEEHGWVFVGIYDGFNGPDATDYLLDNLFHSVHDELKGMLCGDTSEKVLLGLVNGSGRSSKIRNTVVKGCCSSMLDNWDSLNCWKKLELSVKGASSFGHSDALVGLSEALRKTEDAFLKKVDEVIGNNPVLTMMGSCVLVMLMKGEDVYLMNVGDSRAILADHSVNSLQLTMEHSTLVKEEVDRIMKEHPDDPCAITKGRVKGYLNVTRAFGAGFLKEPKQNNAVLESLKVNYIGESPYIVCSPSLYHHRLRPSDRFLILCSDGLQQYFTNEEAVAIVDSFITSSPDTDPAQLLINEALFRAAKKAGMDFHELLNIPHGERRLYHDDISIVIISFKGKIWRSSL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00841 639 MobiDBLite consensus disorder prediction 204 240 - -
Viun10g00841 639 ProSiteProfiles PPM-type phosphatase domain profile. 273 630 IPR001932 -
Viun10g00841 639 PANTHER PROTEIN PHOSPHATASE 2C 248 629 IPR015655 GO:0004722|GO:0006470
Viun10g00841 639 SUPERFAMILY PP2C-like 285 631 IPR036457 -
Viun10g00841 639 MobiDBLite consensus disorder prediction 59 78 - -
Viun10g00841 639 SMART PP2C_4 272 628 IPR001932 -
Viun10g00841 639 Gene3D - 257 636 IPR036457 -
Viun10g00841 639 Pfam Protein phosphatase 2C 351 598 IPR001932 -
Viun10g00841 639 CDD PP2Cc 286 630 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00841 Viun-Chr10 10708512 10711775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00841 1 637 PP2C-type Phosphatase Gene Family AT1G07630 43.909 4.58e-170 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00841 - K01102 gmx:100794388 569.311