Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00835 ATGGACAACATAACATTCATTCAATTGATTTTCTTTGCATACTTATGCATCCATATTTTCTTTAGCCTTAGCAACAAAAACACAAAACATCCTAATCTACCACCTGGTCCTCCCAGTTACCCCATCATAGGAAACATTTTACAACTTTGGCCATCAAAACTGCACCAAGCACTTCATAAACTCTCCAAAACCTATGGACCTATCATGAGTGTTAAAATAGGCACCATCACCACTATTGTCATTTCCTCTCCCAACATTGCCAAAGAAGCCCTTCACAAAAAAGACCGAGCCTTAGCAAGCCGATTCGTACCTGAGTCTGTTCAAGCACTTTCACACCATCAATCTTCTGTAGTGTTCCTTCCCGTGTCATCAAAATGGAACACCCTCAGAAAAGTTTGTGCCACCCAAATTTTCTCCACCCTCCAACTTGATTCCACCCAATCTCTGCGCCATAGAAAGATGAAGGAGCTGCTTGATTACTTGCACGAAAATTGCGAAAAGGGTCGTGCTGTTGATATTGGTGAGACCGCGTTTACCACAGTGCTTAACGCAATATCAAACACCCTTTTTTCGCTTGACTTGGCTTCCCATAGTTCTGGTGTTTCTCAGAAGTTTCGCAGTGTTATTTCTAGTGTGCTCGATGAAGCTTCGAAGCCTAATGTTGCAGACTATTACCCTGTTTTTCGTAGATTTGATCCGCAGGGTGCGCGACGAAGGATGAAACGCTATTACCGAACGTTGCTTGATGTGTTTGATTGCATTGTTGAAGAAAGAATTCAGAGGGTTGGTTCCGTTCATGGAAATGATGTGCTAGAGTCGTTTCTTGATATCATCCGAAGGGAAAATTCAGAATTGACACGCCATGATGTGTTGCATCTGTTTCTGGATTTATTCGTGGCTGGATTAGACACCACATCAGCCACAATAGAGTGGGTTATGGCAGAGTTGCTGCACAACCCTGAAAAATTATCGAAAACCAAAAGGGAACTTGAACAAGTTTTTGGTGAAACTGGGTTTGAACCTGAAGATTCAACCATATCCAAGCTCACTTACCTACAAGCCGTGGTGAAAGAAACCCTAAGATTGCACCCAACAGCCCCAATATTGATTCACAAATCAGTGTCTGAAGTAGACATATGTGGCTTTCATGTTCCCAAAGATGCACAAGTTCTTGTTAATGTATGGAGCATGGGGCGAGACTCGGACACTTGGGCAGACCCAGATTCATTTGTACCTGAAAGATTTTTAGATAATGAAAAGGATTTCAGAGGAGAAGATCATGGTTTCATTCCCTTTGGGTCTGGCAGAAGAATGTGCCCTGGTGTTGCACTGGCTAATAGAATTGTTCATACCGTGTTGGCCTCACTTCTGTACCATTTTGATTGGAAGCTAGCAGATGGAGAAAAATCAGAGGATATGGACATGACTGAAAAATTCAGCATTACTTTGCATAAAGTCAAGCCTCTGAAGACAATTCCCATTAGAAAATGA 1491 0.4219 MDNITFIQLIFFAYLCIHIFFSLSNKNTKHPNLPPGPPSYPIIGNILQLWPSKLHQALHKLSKTYGPIMSVKIGTITTIVISSPNIAKEALHKKDRALASRFVPESVQALSHHQSSVVFLPVSSKWNTLRKVCATQIFSTLQLDSTQSLRHRKMKELLDYLHENCEKGRAVDIGETAFTTVLNAISNTLFSLDLASHSSGVSQKFRSVISSVLDEASKPNVADYYPVFRRFDPQGARRRMKRYYRTLLDVFDCIVEERIQRVGSVHGNDVLESFLDIIRRENSELTRHDVLHLFLDLFVAGLDTTSATIEWVMAELLHNPEKLSKTKRELEQVFGETGFEPEDSTISKLTYLQAVVKETLRLHPTAPILIHKSVSEVDICGFHVPKDAQVLVNVWSMGRDSDTWADPDSFVPERFLDNEKDFRGEDHGFIPFGSGRRMCPGVALANRIVHTVLASLLYHFDWKLADGEKSEDMDMTEKFSITLHKVKPLKTIPIRK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00835 496 CDD CYP76-like 62 493 - -
Viun10g00835 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 495 - -
Viun10g00835 496 Pfam Cytochrome P450 34 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 SUPERFAMILY Cytochrome P450 34 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 Gene3D Cytochrome P450 19 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00835 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Viun10g00835 496 FunFam Cytochrome P450 76C4 25 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00835 Viun-Chr10 10570952 10574324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00835 8 496 Cytochrome P450 AT2G45550 43.738 2.82e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00835 - - pvu:PHAVU_010G012700g 778.089