Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00799 ATGGGTGACATAGATTTTGACGTGCTCGTTAAGGTCCATGTCACCACAATAGCATTCCAGCGTGAAGGCTTTCCATTGGCTAGGGAGAGGGGTTTTGGTGATGTCGTCGATGAAGGGATGACGGCGTTTGTGTGGGTATGTTGGTATGGGATGTCTAATAGCAGTTGGGAAGGTGGTGGTTTGGCAAGAAATGAATACCAGAGTCTCATATTATATTATATTATACATAGCAATAGCTTGCTTCAGTTGAGAGAAATGGAAGTGAAAGCAGAGATTGTATCTAAGAGCACAATAAAGCCATCTTCAACAACACCCAATAAGCTTCGACACTTCAAACTCTCTCTCATCGATCAATTGGCTCCTCCGTTCTACGTCCCTATTCTCCTCTTTTACTCTGCTTCCGACGCCACAAACACCAAAACAATATCTCAAAAATTGAAGGCTTCACTATCAGAAGTCCTCACTCTCTATTACCCCTTTTGCGGAACCCTCAGAGGCAACTCAACCGTCGAGTGCAACGATGAGGGCGTTGTTTTCACCGAGTGTAGAGTCCCCATGGAACTCTCAAGCCTTCTCAAAGACCCTGACCTTCATCAGATCAACCACCTTTTCCCATGCGATCCCTTCAACCCTGCAAGAGAAACTCTGACTGGGAACATGGCAGTTCAGTTGAACCAGTTCACGTGTGGAGGTCTTGCGCTTGGCGTCTGCTTCTCACACAAGATCACTGATGCTTCCACTGCATCATCCTTCCTCACTTCTTGGGCTGCAACATCAAGAGGAGAAGGCAACAAACTGATACTACCTCAACTGGAAGAAGCGGCGCTGGTTTTTCCGCCGAGGAAGATAGAAATGAGCTTGATTCGCGGCATGATGGGCCACAAAAACATTGTGACAAAGAGGTTCGTGTTTAACAGAACCAACATATCTAGACTGAAGCAAAAGTTGGGGAGCTTCGACTTCACTCCCACCAGTGTTGAAGCCGTGACAGCACTCATATGGAAATCATCACTGGAAGCTGCGAAAGCAAATTCAGAGGAAGGAAAAATTCCGGCGTCTATGATATCCCACGCGGTGAACATTCGCAGCCGAATGGCCCAAACCTTTTCGGAGCATTCCATGGGAAATCTGTGGCAACAGGCGGTGTCTCCGGTGGTGGAGGTGGAAGGAGAAGTGGGGCTGCGCGATTTGGGTGAGAGAGTGAGGGAAACGATAAGAAAAGTTGATGGAAAATATTTGAGTATGGTTCAGGGTGATGAGTTTTATAAGGTGATGGAGTGTTTGAAGGAAGCAAGAACAATGGTCGCAGAAAAGGGTGTTCCTTGTTATAGCTTTAGCAGTTGGGTGAGGTTTGGGTTCTATGAAACGGATTTCGGATGGGGAAAACCAAGTTACGTGCGCACTATCGGAGTGCCTATAAAAAACGTGGTCATTTTTATGGCTACTAAGGTTGGTGATGGCATTGAGGCATGGATAACCTTGACTTCGCGTGACATGGTCCATTTTGAGAAAAATCCAGAACTTCTCCAGTTTGTCTCGTTTGATTCTTAA 1551 0.4629 MGDIDFDVLVKVHVTTIAFQREGFPLARERGFGDVVDEGMTAFVWVCWYGMSNSSWEGGGLARNEYQSLILYYIIHSNSLLQLREMEVKAEIVSKSTIKPSSTTPNKLRHFKLSLIDQLAPPFYVPILLFYSASDATNTKTISQKLKASLSEVLTLYYPFCGTLRGNSTVECNDEGVVFTECRVPMELSSLLKDPDLHQINHLFPCDPFNPARETLTGNMAVQLNQFTCGGLALGVCFSHKITDASTASSFLTSWAATSRGEGNKLILPQLEEAALVFPPRKIEMSLIRGMMGHKNIVTKRFVFNRTNISRLKQKLGSFDFTPTSVEAVTALIWKSSLEAAKANSEEGKIPASMISHAVNIRSRMAQTFSEHSMGNLWQQAVSPVVEVEGEVGLRDLGERVRETIRKVDGKYLSMVQGDEFYKVMECLKEARTMVAEKGVPCYSFSSWVRFGFYETDFGWGKPSYVRTIGVPIKNVVIFMATKVGDGIEAWITLTSRDMVHFEKNPELLQFVSFDS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00799 516 Gene3D - 86 286 IPR023213 -
Viun10g00799 516 PANTHER F21J9.9 91 513 - -
Viun10g00799 516 Pfam Transferase family 89 508 - -
Viun10g00799 516 Gene3D - 294 511 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00799 Viun-Chr10 9111450 9117146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00799 88 504 Monolignol Biosynthesis Gene Families AT5G48930 23.736 3.23e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00799 - K13065 gmx:100792323 630.172