Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00796 ATGTTGAGAGAAATGGAAGTGAAAGGTGAGATTGTATCAAAGGAGACAATAAAGCCATCTTCAACAACACCCAATGAGCTTCGACACTTCAAACTCTCTCTCATCGATCAATTGGCTCCTCCATTTTACGTTCCTATAATCCTCTTATACTCTGCTTCCGATGCCACAAACACCAAAACAATATCTCAAAAATTGAAGGCTTCTCTATCAGAAGTCCTCACTCTCTATTACCCCTTTTGCGGAACCCTCAGAGGCAACTCAACCGTCGAGTGCAACGATGAGGGCGTTGTTTTCACCGAGTGTAGAGTCCCCATGGAACTCTCAAGCCTTCTCAAAGACCCTGACCTTCATCAGATCAACCACCTTTTCCCATGCGATCCCTTCAACCCTGCAAGAGAAACTCTGACTGGGAACATGGCAGTTCAGTTGAACCAGTTCACGTGTGGAGGTCTTGCGCTTGGCGTCTGCTTCTCACACAAGATCGCTGATGCTTCGGCAGCAGCATCCTTCCTCACTGCTTGGGCTGCATCATCAAGGTATATTATTGGTCACACATTCCAAATAGGAGAAGGCAACAAACTGATACTACCTCAAATGGAAGAAGGGGCACTGGTTTTTTCGCGGAGGAAGATAGAAATGGACTTGACTGGTCGCATGATGCGCAAAAACATTGTGACAAAGAGGTTCGTGTTCAACAGGAGCAACATATCTAGACTGAAGCAAAAGTTGGGGAGCTTCGACTTCACTCCCACCAGTGTTGAAGCCGTGACAGCACTCATATGGAAATCATCACTGGAAGCTGCGAAAGCAAATTCAGAGGAAGGAAAAATTCCGGCGTCTATGATATCCCACGCGGTGAACATTCGCAGCAGAATGGCCCAAACCTTTTCGGAGCATTCCATGGGAAATCTGTGGCAACAGGCGGTGTCTCCGGTGGTGGAGGTGGAAGGAGAAGTGGGGCTGCGCGATTTGGGTGAGAGAGTGAGGGAAACGATAAGAAAAGTTGATGGAAAATATTTGAGTATGGTTCAGGGTGATGAGTTTTATAAGGTGATGGAGTGTTTGAAGGAAGCAAGAACAATGGTCGCAGAAAAGGGTGTTCCTTGTTATATCTTTAGCAGTTGGGTGAGGTTTGGGTTCTATGAAACGGATTTCGGATGGGGAAAACCATGTTACGTGCGCACTATTGGAGTGCCTATAAAAAATGTGGTGATTTTTATGGCTACTAAGGCTGGTGATGGCATTGAGGCATGGATTACCTTGACTACGCGTGACATGGTACATTTTGAGCAGAATCCAGAACTTCTCCAGTTTGTTTCCTTTGATTCTCCATGA 1335 0.4607 MLREMEVKGEIVSKETIKPSSTTPNELRHFKLSLIDQLAPPFYVPIILLYSASDATNTKTISQKLKASLSEVLTLYYPFCGTLRGNSTVECNDEGVVFTECRVPMELSSLLKDPDLHQINHLFPCDPFNPARETLTGNMAVQLNQFTCGGLALGVCFSHKIADASAAASFLTAWAASSRYIIGHTFQIGEGNKLILPQMEEGALVFSRRKIEMDLTGRMMRKNIVTKRFVFNRSNISRLKQKLGSFDFTPTSVEAVTALIWKSSLEAAKANSEEGKIPASMISHAVNIRSRMAQTFSEHSMGNLWQQAVSPVVEVEGEVGLRDLGERVRETIRKVDGKYLSMVQGDEFYKVMECLKEARTMVAEKGVPCYIFSSWVRFGFYETDFGWGKPCYVRTIGVPIKNVVIFMATKAGDGIEAWITLTTRDMVHFEQNPELLQFVSFDSP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00796 444 PANTHER F21J9.9 10 440 - -
Viun10g00796 444 Pfam Transferase family 10 435 - -
Viun10g00796 444 Gene3D - 221 439 IPR023213 -
Viun10g00796 444 Gene3D - 6 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00796 Viun-Chr10 9048861 9050453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00796 7 431 Monolignol Biosynthesis Gene Families AT5G48930 22.796 3.85e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00796 - K13065 gmx:100792323 608.601