Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00777 ATGGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTATGAGGAATAAGCAAACCCCTTGTCCCATCTTCAGAAATGCGATGGCCGAGTTGGGAAGGCTACTAATGTATGAAGCTGCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTGAATCACCAGTGACTGTAGCCTCCGTGGAATTCATTGACCCAAGGCAGCCTGTTGCTGTAATTCCAATCTTGAGGGCAGGCCTTGCTCTTGCTGAACATGCTTCATCAATCTTGCCTGCAACAAAAACATATCATCTAGGAATAAGCAGAAACAAGGAAACCCTTCAGCCAGCAATATATTTGAACAAGTTACCTGAGAAATTTGCTGATGGATGTAAAATTTTTGTGGTTGATCCTATGCTGGCATCAGGTGCTACTATGGTGGCTGCTCTGAACCTCTTAAAGGAACGAGGAGTTGACAACAAGCATGTTAAAGTGATATCAGCTGTTGCGGCTCCTCCGGCTCTTCAAAAGCTTAGTGAGCAGTTTCCTGGGCTTCATGTTTATACTGGAATAATTGACCCTGAAGTTCATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCAGGGGACCGGAGCTTTGGTACAGATTCATGA 642 0.4517 MVYVPPHPLIKHWVSVMRNKQTPCPIFRNAMAELGRLLMYEAARDWLPTVSGEIESPVTVASVEFIDPRQPVAVIPILRAGLALAEHASSILPATKTYHLGISRNKETLQPAIYLNKLPEKFADGCKIFVVDPMLASGATMVAALNLLKERGVDNKHVKVISAVAAPPALQKLSEQFPGLHVYTGIIDPEVHEKGFIIPGLGDAGDRSFGTDS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00777 213 SUPERFAMILY PRTase-like 1 210 IPR029057 -
Viun10g00777 213 FunFam Uracil phosphoribosyltransferase 1 212 - -
Viun10g00777 213 CDD PRTases_typeI 67 187 IPR000836 -
Viun10g00777 213 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3 188 - -
Viun10g00777 213 Pfam Uracil phosphoribosyltransferase 4 211 - -
Viun10g00777 213 Gene3D - 1 211 IPR029057 -
Viun10g00777 213 NCBIfam uracil phosphoribosyltransferase 1 211 IPR005765 GO:0004845|GO:0006223
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00777 Viun-Chr10 8603485 8610892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00777 1 213 PRT Gene Family AT3G53900 72.300 2.46e-121 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00777 K00761 - gmx:100797953 382.489