Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00762 ATGGCAAACCTCAACATGTTCCTCGGACTCTTGTCTTTGTTGCTGTTCCTTCTGGTCCCAGTTTCTTCTCAGCCTAACCAGATCTTCTATGCCGGATTCAAGGGTTTGGATAGCAGCAACATGACCCTTGATGGTGTAGCAGAAATTGAGCATAATGGGATACTGAAACTCACAAATGATTCAAGTAAAGTAATGGGTCATGCTTTTTTTCCAACTGCTCTTCAGTTCAAGAACACCGGTGATGGTAAAGCTCTCTCCTTTTCTTCCTCTTTTGCTCTGGCTATTGTTCCTGAGTTTCCAAAGCTTGGAGGGCATGGCCTTGCTTTTACAATTGCAGCTTCCAAGGATCTGAAGGCTCATCCAAGCCAGTATCTTGGTCTGCTTAACTCAAGCAGCATAGGGAACTTCTCCAACCACCTTTTTGCTGTTGAGTTTGACACAGCCCAGGATTTTGAGTTTGCGGACATCAATGATAACCATGTTGGAATTGACATCAATAGCTTGGTATCCAATGCTTCTGCTCCTGCTGGGTTCTACACTGGGGATCATGATTCAGACAAACAGAATCTCACTCTCAAAAGTGGGCAACCTATTCTGGTTTGGGTTGATTATGATTCTGCTCAAAATGTTATTAATGTCACAATTTCTTCATCTTCTACCAAACCCACAAGACCACTCTTGTCTTTTCCTGTGGATCTTTCACCAATCCTTAGGGATTCCATGTATGTAGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGGCCAGCTCCACCCCTTGATCTCTCTTCCCTCCCGCACCTTCCAGGGCCAAAGAAGAAACACACGTCTCTGATAATTGGGGTTTTAGTTTCTGGCGCTGTTCTTGCATTGTTTGCTGTCTTACTCGGCTTCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTGAAGAAAGCAACAAAAGGTTTCAAGGACAAAGAGCTGCTTGGAAAAGGTGGATTTGGGAGTGTCTACAAAGGAACATTGCCAAATTCCAACACCCAAGTTGCTGTCAAGAGAATCTCACACGACTCCAAACAAGGCCTGAGGGAATTTGTGTCAGAAATAGCCAGCATAGGGAGGCTCCGCCACCGGAATCTGGTACAGCTTCTGGGGTGGTGTCGCCGGCGTGGTGACCTCCTCCTTGTGTATGATTTCATGCCTAATGGGAGCTTGGACAAGTACCTGTTTGATGAACCAGAAAGAATCCTGAGTTGGGAGCAGAGGTTTAAGGTGGTTAAGGATGTTGCTTCTGCTCTTTTGTATCTGCATGAGGGGTATGAGCAGGTGGTGATACACAGAGATGTTAAGGCTAGTAATGTGCTGCTAGATGGTGAACTAAATGGAAGATTAGGAGATTTTGGATTGGCAAGGTTGTATGAACATGGTGCTAACCCAAGTACCACAAGGGTGGTGGGGACATTAGGGTATTTGGCACCTGAGGTGCCTAGGACAGGGAAGGCCACACCTAGTTCAGATGTTTTTGCATTTGGTGCAGTTTTACTTGAGGTGGCATGTGGGTTGAGGCCACTAGAGCCAAAGGCAATGCCAGAGGATTTGGTTTTGGTTGATTGTGTGTGGAACAAGTACAAGCAAGGGAGAATACTTGATGTGGTGGACCCTAGAATGAATGGTGTTTTCAATGAAAGAGAGGTGGTGATGGTGTTGAAATTGGGGCTTTTGTGTTCAAATGGTTCTCCCAGTATTAGGCCTAGCATGAGACAGGTCGTGAGGTTTTTGGAGGGAGGTGTTGGTGTGCCAGATGAGTTGAGAAGGCCAGGAGAGACAGGTTCTGAAGAGGGTTTTGATGAGTTCTTAAATTTACTTGAATCTTCTTCTTTTGATCAGATGAGCAGAAGCACCTATGCTGCTTCTTTTACTGATACATCACTCTTTACTCCTACTGCTAAAGGAGAAACAATGTGA 2034 0.4533 MANLNMFLGLLSLLLFLLVPVSSQPNQIFYAGFKGLDSSNMTLDGVAEIEHNGILKLTNDSSKVMGHAFFPTALQFKNTGDGKALSFSSSFALAIVPEFPKLGGHGLAFTIAASKDLKAHPSQYLGLLNSSSIGNFSNHLFAVEFDTAQDFEFADINDNHVGIDINSLVSNASAPAGFYTGDHDSDKQNLTLKSGQPILVWVDYDSAQNVINVTISSSSTKPTRPLLSFPVDLSPILRDSMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPHLPGPKKKHTSLIIGVLVSGAVLALFAVLLGFYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGKGGFGSVYKGTLPNSNTQVAVKRISHDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMPNGSLDKYLFDEPERILSWEQRFKVVKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGAVLLEVACGLRPLEPKAMPEDLVLVDCVWNKYKQGRILDVVDPRMNGVFNEREVVMVLKLGLLCSNGSPSIRPSMRQVVRFLEGGVGVPDELRRPGETGSEEGFDEFLNLLESSSFDQMSRSTYAASFTDTSLFTPTAKGETM 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00762 677 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Viun10g00762 677 FunFam L-type lectin-domain containing receptor kinase S.4 423 628 - -
Viun10g00762 677 Gene3D Transferase(Phosphotransferase) domain 1 423 624 - -
Viun10g00762 677 CDD lectin_legume_LecRK_Arcelin_ConA 30 267 IPR001220 GO:0030246
Viun10g00762 677 ProSiteProfiles Protein kinase domain profile. 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00762 677 Gene3D - 29 269 - -
Viun10g00762 677 FunFam L-type lectin-domain containing receptor kinase S.4 24 271 - -
Viun10g00762 677 FunFam Lectin-domain containing receptor kinase A4.3 331 422 - -
Viun10g00762 677 PANTHER - 20 620 - -
Viun10g00762 677 Pfam Protein kinase domain 346 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00762 677 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Viun10g00762 677 SUPERFAMILY Protein kinase-like (PK-like) 328 626 IPR011009 -
Viun10g00762 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 285 IPR013320 -
Viun10g00762 677 Pfam Legume lectin domain 29 277 IPR001220 GO:0030246
Viun10g00762 677 CDD STKc_IRAK 352 618 - -
Viun10g00762 677 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00762 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00762 Viun-Chr10 8114575 8117000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00762 21 664 Receptor kinase-like Gene Family AT3G55550 60.123 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun10g00762 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00762 - - gmx:100801247 1129.78