Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00739 ATGGCTCTTCCAAGACCAAGTAGTGAAGAAAAAACCCTTTCTCACCTTAAAGAAGGAGGAGCAGCATCATCATCATCAGCACCAACACCACCACCACCACCACCACCACCTTCATCATCTTCTTCATGGAATAGGCTTCACACTTTCCCTCCTTTGAATCTTCACAACAAGACTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAACCACAGCCATTAATGTTCATTCTGCAGTAGCTCTACCAAACAGTAACCTTAACCAACGTAATTTGACAGAACCTCAGTTTCAAACTGCTTTTCCTGGGAAGCGTCGCAGAGGAAGAAACCCTGCGGATAAGGAACATCGACGTCTCAAGAGGTTGTTGCGAAATAGGGTTTCTGCTCAACAAGCCCGAGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGCCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCGAGGCCAAAAGTTGATGATAGCAATGAACAAAAGCAAGAGCAGTTAAGTAAGAGCTAA 606 0.4208 MALPRPSSEEKTLSHLKEGGAASSSSAPTPPPPPPPPSSSSSWNRLHTFPPLNLHNKTSKIEDSDEDMFTVPDVETTAINVHSAVALPNSNLNQRNLTEPQFQTAFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARAKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSNEQKQEQLSKS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00739 201 Gene3D Single helix bin 141 182 - -
Viun10g00739 201 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Viun10g00739 201 MobiDBLite consensus disorder prediction 41 57 - -
Viun10g00739 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 140 IPR004827 GO:0003700|GO:0006355
Viun10g00739 201 MobiDBLite consensus disorder prediction 26 40 - -
Viun10g00739 201 SUPERFAMILY Leucine zipper domain 122 181 IPR046347 GO:0003700|GO:0006355
Viun10g00739 201 Coils Coil 138 172 - -
Viun10g00739 201 MobiDBLite consensus disorder prediction 1 63 - -
Viun10g00739 201 CDD bZIP_HY5-like 132 173 - -
Viun10g00739 201 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 23 196 IPR044280 GO:0000981|GO:0045944
Viun10g00739 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 183 IPR004827 GO:0003700|GO:0006355
Viun10g00739 201 FunFam Transcription factor HY5 141 182 - -
Viun10g00739 201 Pfam bZIP transcription factor 119 178 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00739 Viun-Chr10 7581367 7586874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00739 108 190 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 78.313 1.70e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g00739 bZIP_1 3.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00739 K16241 - gmx:778143 302.753