Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00738 ATGGCTCTTCCAAGACCAAGTAGTGAAGAAAAAACCCTTTCTCACCTTAAAGAAGGAGGAGCAGCATCATCATCATCAGCACCAACACCACCACCACCACCACCACCACCTTCATCATCTTCTTCATGGAATAGGCTTCACACTTTCCCTCCTTTGAATCTTCACAACAAGACTAGCAAAATTGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAACCACAGCCATTAATGTTCATTCTGCAGTAGCTCTACCAAACAGTAACCTTAACCAACGTAATTTGACAGAACCTCAGTTTCAAACTGCTTTTCCTGGGAAGCGTCGCAGAGGAAGAAACCCTGCGGATAAGGAACATCGACGTCTCAAGAGGTTGTTGCGAAATAGGGTTTCTGCTCAACAAGCCCGAGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGCCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCGAGGCCAAAAGTTGATGATAGCAATGAACAAAAGCAAGAGCAGTTAAGTAAGAGCTAA 603 0.4212 MALPRPSSEEKTLSHLKEGGAASSSSAPTPPPPPPPPSSSSSWNRLHTFPPLNLHNKTSKIDSDEDMFTVPDVETTAINVHSAVALPNSNLNQRNLTEPQFQTAFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARAKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSNEQKQEQLSKS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00738 200 MobiDBLite consensus disorder prediction 41 57 - -
Viun10g00738 200 Gene3D Single helix bin 140 181 - -
Viun10g00738 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 182 IPR004827 GO:0003700|GO:0006355
Viun10g00738 200 SMART brlzneu 117 181 IPR004827 GO:0003700|GO:0006355
Viun10g00738 200 SUPERFAMILY Leucine zipper domain 121 180 IPR046347 GO:0003700|GO:0006355
Viun10g00738 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 124 139 IPR004827 GO:0003700|GO:0006355
Viun10g00738 200 MobiDBLite consensus disorder prediction 26 40 - -
Viun10g00738 200 Pfam bZIP transcription factor 118 177 IPR004827 GO:0003700|GO:0006355
Viun10g00738 200 Coils Coil 137 171 - -
Viun10g00738 200 MobiDBLite consensus disorder prediction 1 60 - -
Viun10g00738 200 CDD bZIP_HY5-like 131 172 - -
Viun10g00738 200 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 23 195 IPR044280 GO:0000981|GO:0045944
Viun10g00738 200 FunFam Transcription factor HY5 140 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00738 Viun-Chr10 7581357 7586874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00738 107 189 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 78.313 1.72e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun10g00738 bZIP_1 3.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00738 K16241 - gmx:778143 296.204