Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00737 ATGACTGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACAAGTTTCAGGGATTCATCTAACATTTCGTGGGTACCAGACACCACCTATGTAACCACAGGAAAGACTGCTACCATCACATACAGTGATGGTTCCAACAACTCACTGAACATCTCAGCTCGGTTCTTCCCAAATTCTAGAAGGCGAAAATGTTACAGAATACCAGCAAACAATTCAACAGCTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCTCCTAAGTTCTATGTTTCAATTGGGACATCTATTGCAGCCACCATAAATCTTGCTGAAGATGATCCATGGAGTGAAGAGTTTCTATGGACAGTCAACATGGATACACTGTCATTCTGCTTAATTGCAATGCCTGGAGGGGGTTCACCTGTAATTTCTTCTCTTGAAATCAGACCACTTCCTCAGAGAGCCTACACAAATGGCATGACAGATTTTCCTAACAAGTTGCTTAGGAAGAGTTATAGAATTGATTGTGGGCATTCAAATGATTCCATAAGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCCATTGGGTTTAAGATTCAACTTAGCTTCAGACAGTCCAGTCTTGTAGAAGAACCACCAGCAGCTGTTCTTCAAACTGGAAGAGTTTTGGCAAGAAGTAATGCTCTGACATACAACCTCCCTCTTGATGCATTAGGGGACTACTACATCATCCTCTACTTTGCAGGGATTCTTCCTGTCTTCCCCTCATTTGATGTTCTTATAAATGGAGAACTAGTAAAATCAAACTACAAAATAAATAGCTCTGAAACCAGTGCTTTATACTTAACGCGAAAGGGAATTGGAAGCTTGAATATAACTTTAAAGAGTATCAGCTTTTACCCTCAGATCAATGCATTTGAGGTTTATAAGATTGTTGATATTCCAACTGATGCCTCATCAACCACAGTTTCAGCACTGCAGGTTATTCAGCAGTCCACTGGATTGGATCTTGGATGGCAGGATGATCCATGTCTGCCTTCTCCATGGGAGAAAATTCACTGTGAAGGAAGCCTTGTTACATCATTGGATCTTTCAGACATAAATTTGAGATCCGTTAGTCCAACATTCGGTGACTTACTAGACCTCAAAATACTGGATTTGCACAACACATCGCTTACCGGTGAAATACAGAATTTGGATGGCTTGCAGCATATTGAGAAACTGAACCTGAGTTTCAATCAGCTAACATCTATTGGTGCAGACCTTCAGAACTTGATTAACCTTCAAATATTAGACTTGCAGAACAATAGTTTAATGGGAACAGTACCTGATAGCTTGGGAGAGTTAGAGGACCTCCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCTCTGCCACAGTCTTTGAACAAAGAAACGTTGGAGATCAGGACATCTGGTAATTTATGTCTTACCTTTTCCACAACATCATGTGATGATGATGCATCATCCAGTCCTCCAATTGAAGCACCGCAAGTTACTGTAGTTCCTCAGAAGAAGCACAATGTACATAGCCATCTAGCAATCATACTAGGCATGGTTGGAGGAGCCATAATAGCCTTTCTCTTAATGTGTATTTCAGTATTGATATACAAGACCAAACAACACTATGAAGCCTCCCACACATCAAGAGGAGAAATGGATATGAGGAACTGGGGTGCTGCAAAAGTATTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAACTTCAAGGAAATCATAGGAAAGGGTAGTTTTGGATCTGTTTATCTTGGTAAACTCCCAGATGGAAAATCTGTAGCTGTCAAAGTTCGTTTTGACAAATCTCAACTGGGTGCTGATTCTTTCATCAATGAGGTTAATCTTTTATCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTGGTTTATGAGTACTTACCTGGTGGATCCCTGGCTGATCACCTCTATGGTTGTCAAAAGACTTCCTTAAGCTGGGTGAGAAGGTTGAAAATTGCTGTTGATGCAGCAAAAGGTTTGGACTATTTGCACAATGGAAGTGAACCAAGAATCATACATCGTGATGTGAAGTGCAGTAACATCCTCTTGGACATGGAAATGAATGGCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAGGCAGATGCAACTCATGTCACCACTGTTGTTAAGGGCACTGCTGGTTACCTTGATCCAGAGTATTATTCCACTCAACAGTTGACTGAGAAAAGTGATGTATATAGTTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAAACCCTGATTCATTCAACTTGGTGTTATGGGCGAAACCATACTTGCAGGCTGGTGCATTTGAGATAGTGGATGAAGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAAGAAAGCAGCTTTCATTGCTATAAAGTCAGTGGAGAGGGATGCATCACAGAGACCATCTATTGCAGAGGTGTTGACAGAGCTAAAGGAAGCCTACAATATTCAACTCAGATTCCTTGAATCTTGTGAAAATGAGAATTGA 2646 0.404 MTGFLSLSCGGRTSFRDSSNISWVPDTTYVTTGKTATITYSDGSNNSLNISARFFPNSRRRKCYRIPANNSTALVLVRAKFVYKNYDGLGKPPKFYVSIGTSIAATINLAEDDPWSEEFLWTVNMDTLSFCLIAMPGGGSPVISSLEIRPLPQRAYTNGMTDFPNKLLRKSYRIDCGHSNDSIRYPLDPFDRIWDADRSFTPFHVAIGFKIQLSFRQSSLVEEPPAAVLQTGRVLARSNALTYNLPLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYKINSSETSALYLTRKGIGSLNITLKSISFYPQINAFEVYKIVDIPTDASSTTVSALQVIQQSTGLDLGWQDDPCLPSPWEKIHCEGSLVTSLDLSDINLRSVSPTFGDLLDLKILDLHNTSLTGEIQNLDGLQHIEKLNLSFNQLTSIGADLQNLINLQILDLQNNSLMGTVPDSLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTTSCDDDASSSPPIEAPQVTVVPQKKHNVHSHLAIILGMVGGAIIAFLLMCISVLIYKTKQHYEASHTSRGEMDMRNWGAAKVFSYKEIKVATRNFKEIIGKGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGCQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNGKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGNPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMKKAAFIAIKSVERDASQRPSIAEVLTELKEAYNIQLRFLESCENEN 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00737 881 SUPERFAMILY Protein kinase-like (PK-like) 574 863 IPR011009 -
Viun10g00737 881 Gene3D Phosphorylase Kinase; domain 1 566 669 - -
Viun10g00737 881 Pfam Protein kinase domain 596 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00737 881 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Viun10g00737 881 Gene3D Transferase(Phosphotransferase) domain 1 670 876 - -
Viun10g00737 881 Gene3D - 170 324 - -
Viun10g00737 881 Gene3D Ribonuclease Inhibitor 334 506 IPR032675 -
Viun10g00737 881 SMART serkin_6 594 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00737 881 ProSiteProfiles Protein kinase domain profile. 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00737 881 SMART LRR_typ_2 437 461 IPR003591 -
Viun10g00737 881 SMART LRR_typ_2 414 436 IPR003591 -
Viun10g00737 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Viun10g00737 881 SUPERFAMILY L domain-like 336 484 - -
Viun10g00737 881 Pfam Malectin-like domain 7 323 IPR024788 -
Viun10g00737 881 CDD STKc_IRAK 600 865 - -
Viun10g00737 881 FunFam serine/threonine-protein kinase PBS1-like 561 669 - -
Viun10g00737 881 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 670 874 - -
Viun10g00737 881 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Viun10g00737 881 PANTHER OS07G0107800 PROTEIN-RELATED 417 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00737 Viun-Chr10 7567060 7574033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00737 3 876 Receptor kinase-like Gene Family AT5G48740 62.785 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun10g00737 Malectin_like 1.3e-53 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00737 - - vum:124845082 1633.23