Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00717 ATGCTTCCACCCAACTCTAAAACACACCGACACACACTTTTGGTTCTGACTATTACCATATCAATGGCGGTGCTTGGTTCTGAAGAACTCCTCTTGGCATTTGTTCTTTTCGTCTTAATCTACTATTGGAGGCTCAACAGACACACTCCCATCACGAAGTGGCCCGTGCTTGGCATGCTTCCTGGACCCTTCCTCAATGTGTCCATCATCTTTGATTATGTAACTACGGCTTTGAAAAACAATGGAGGCAATTTCATGTTTGAAGGCCCTTGGCTATCAAACATGAACATATTCGTCACCAGCGACCCTTTCAATGTGCAACACATCACAAGCACAAAGTTTGAAAACTACGGCAAGGGAGATGACTTCAGAGAGATTTTTGAGGTTCTGGGAGATGGGATTTTCAGGTCCGATTCCGAACTATGGAAGTATAACAGAAGTATTCTTCATTCAGCTTTTAAGAAGGTTAATTTTCAATTGTTTATTCAACAAACAATCAAGAACAAGATTGAGAGTTGTCTGCTTCCATTTCTTGAGCATGCATGGAAACAAGGAACGGAAGTGGACCTACAAGAAGCTTTTCAAAGATTAACCTTTGACATCATTTCATCCATAGTTTTAGGATTTGATCCTACTTGCCTTTCCATTGGTTTCCCAGAAGTTGCAACTGAGAAAGCCTTCAGTGAAATAGAGGATGCTCTTCTCTACCGACATCTCATGCCAAGATTCTTATGGAAGCTGCTAAACTGGTTTCAACTTGGGAAAGAGAAGACGGTGAAAGAAAATATTGAAATTATTGACCAAATGTTGTATAAGGAAATTAAATCTAGGAGCAGAGTGCAAGGTCAAAGCAGCGGCAACAGCACACTAGAAGACGAACCACGATTTAGCTTGATAGATGTTCTTATAAGTGAAGTAGGAGAGGGCAAAATGGATGACAAGTTTCTGAGAGACACAGCAATAAATATGCTTGCAGCTGGGAGAGATAGCATTAGTGCAGGTCTCACTTGGTTTTTCTGGTTGGTGGCAACACACCCATCTGTGGAATCTAAGATTCTTGAAGAGATCCGAGAAAAATTACCAGCAAGAGAAGGTAATGGGAAGGACTTTGGTGTGAAATGGCTTAGCAAGTTAACTTTCCTCCATGCAGCATTAAGTGAGACATTAAGGCTCTACCCTCCGGTACCATTAGAGCACAAGAGTGCCTTAAAATCTGATGTGCTTCCAAGTGGTCATTGGATTAATTCAAATACCATGATAGTATATTCCCTATACAGCATGGGAAGGGCAGAGGAAATATGGGGTGAAGATTGCTTGAAATTTAGACCTGAGAGGTGGATCTCAAAGAGTGGAGGGATTATTCACATGCCCTCTCACAAGTTCATTGCATTCAATGCAGGACCAAGAAGTTGTTTGGGTAAAGAAATCAGCTTCATCGAGATGAAGATGATAGCTGCCAATATACTGTGGAATTATCGCATTCACTTGGTGGAAGGCCAAGCCATATCCCCAAGAGTCTCCGTTGTCCTTCTCATGAAACATGGCTTGAAGGTCACAGTGACAAAAAGAAACATATGA 1578 0.4157 MLPPNSKTHRHTLLVLTITISMAVLGSEELLLAFVLFVLIYYWRLNRHTPITKWPVLGMLPGPFLNVSIIFDYVTTALKNNGGNFMFEGPWLSNMNIFVTSDPFNVQHITSTKFENYGKGDDFREIFEVLGDGIFRSDSELWKYNRSILHSAFKKVNFQLFIQQTIKNKIESCLLPFLEHAWKQGTEVDLQEAFQRLTFDIISSIVLGFDPTCLSIGFPEVATEKAFSEIEDALLYRHLMPRFLWKLLNWFQLGKEKTVKENIEIIDQMLYKEIKSRSRVQGQSSGNSTLEDEPRFSLIDVLISEVGEGKMDDKFLRDTAINMLAAGRDSISAGLTWFFWLVATHPSVESKILEEIREKLPAREGNGKDFGVKWLSKLTFLHAALSETLRLYPPVPLEHKSALKSDVLPSGHWINSNTMIVYSLYSMGRAEEIWGEDCLKFRPERWISKSGGIIHMPSHKFIAFNAGPRSCLGKEISFIEMKMIAANILWNYRIHLVEGQAISPRVSVVLLMKHGLKVTVTKRNI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00717 525 PANTHER CYTOCHROME P450 40 518 - -
Viun10g00717 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Viun10g00717 525 Gene3D Cytochrome P450 39 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 SUPERFAMILY Cytochrome P450 53 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00717 525 CDD CYP86A 85 516 - -
Viun10g00717 525 Pfam Cytochrome P450 91 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00717 Viun-Chr10 7338401 7340232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00717 22 524 Cytochrome P450 AT2G23180 42.495 2.97e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00717 - - gmx:100785815 790.801