Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00694 ATGTCTGTTCCAAAAGTTAACGAAAAGTTGCTTGAAGACCTTGAAGTAATGGGATTTCCAAAGGCACAGGCAACCAGAGCACTTCATTATTCTGGCAATACCAGCTTAGAGGATGCTATAAATTGGATAGTTGATCATGAGAATGACATTGATATTGATGAGATGCCATTGGTAGATGTAGACATTGAGGTAGAGTCAACCGAGTCCTTCCCCATCTCAGAAGAAATCAGAATCAAAGCACAGAGTTTAAGGGAACAAGAACGTAAGAGGAAAGAGCAGGAAGAGAAAAGATTGGAGAGAGAAAGGGAGAAGGAGAGGATTCAAGCAGGTAAGAGACTCCTTGAAGCAAAGCGAATTGCAGAAGAAAATGAAAGACAACGGAATTTATCCCTGAGAAAAGCGGAAAAAGAAGAAGAGAAAAGAGCTAGAGAGAGAGTTCTACAGAAACTAGAGCAGGATAAGTTAAATAGAAAATATAAACAAGGATTGCCTTCAGAAGGCCAAGCATCCATCAGATCATCTGCTACTAAACTACAACAGGAAAAGAAGTTAAATCCTGTTTATACAACTACAAAAGCTGAGCAGTTAAGAGAATCTCTGAGGAATCTGAAGCGTAATCATCAGGATAGAGTTGGAAGTTTAAATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGACTTCTTGCATCTTCCTCAAGAAAAGGTTGACATGGCACTGCTGAATTCAGCTGGTTTTGTCTTGAATTCTGCAGTGACAAACCCTTTCTTTGGAGTTTTAAGTACTACTCACAATTAA 810 0.3938 MSVPKVNEKLLEDLEVMGFPKAQATRALHYSGNTSLEDAINWIVDHENDIDIDEMPLVDVDIEVESTESFPISEEIRIKAQSLREQERKRKEQEEKRLEREREKERIQAGKRLLEAKRIAEENERQRNLSLRKAEKEEEKRARERVLQKLEQDKLNRKYKQGLPSEGQASIRSSATKLQQEKKLNPVYTTTKAEQLRESLRNLKRNHQDRVGSLNGGVEFLELCGFERTGDFLHLPQEKVDMALLNSAGFVLNSAVTNPFFGVLSTTHN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00694 269 Coils Coil 119 156 - -
Viun10g00694 269 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Viun10g00694 269 MobiDBLite consensus disorder prediction 82 105 - -
Viun10g00694 269 Coils Coil 76 108 - -
Viun10g00694 269 Gene3D - 8 53 - -
Viun10g00694 269 Pfam UBA/TS-N domain 7 43 IPR015940 -
Viun10g00694 269 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
Viun10g00694 269 CDD UBA_PUB_plant 6 53 - -
Viun10g00694 269 PANTHER F13M7.16 PROTEIN 208 264 - -
Viun10g00694 269 SUPERFAMILY PUG domain-like 200 260 IPR036339 -
Viun10g00694 269 Gene3D - 186 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00694 Viun-Chr10 7088663 7100983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00694 1 264 C2H2 Transcription Factor Family AT1G04850 51.948 6.11e-74 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00694 - K24348 gmx:100781260 407.527