Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00688 ATGGGGTTAAGTTGGGTTTGGATGATTGTTGCTACTCTATTGGCATGTTACATTTTTGTAAAGAAAATAGTGAGAAAGTCGAATGAGTGGTATTATGATATGAAATTAGGAAACAAACATGGCTTATTGCCTCCTGGTCATATGGGTTGGCCTCTTATTGGAAACATAATTCCCTTCATCAAATATTTCAACTCTGGTCATCCTGATTCATTCATCAACAACTTAGTCTCCAAATATGGAGAAAGTGGTATCTACAAAACTCATTTGCTGGGGAAACCAAGCATCATCATTTGCACACCTGAGATGTGCAAGAGAGTGTTGAATGATGATGACAACTTCAAGCAAGGCTATCCAAAATCCACCAGTGAGCTGTTGAAAAGCAAGGCTTTGACCAATGTGTGCAGTACAGAACACAAAGGTTTAAGAGAGTTGGTGAGTTCTGGAATTTTGGGTCAGAAAGTGCTAGCCATGAACCTAGAAATTGTGGAAAAGATAGTGATTAATTCACTGGAAGAGTTATCCAGAATGGAACAACCAGTTCAGGTTTTCAAAGAGATGGAAAAGATTTCCTTTGAAGTCATTGCTCACATCTTGATGGGTTCTCACATTCATTCCAACATTGAAAAGTTGACAGAGTTGTTTCACCAATTCTCCAAATGCAATCCCATTTATTCTCTTCCCATTAACTTCCCTGGTTTTCCTTTCCATCAAGGACTCAAGGTACGAAAGAAGTTGTTGAAGGCCATTGAATCGATTGTGGGTGAAAGGAGGTCAATGATGAAAATGGTAAAGAAGGGAGAAAATAAGAAAGATCTGATTGAACTTGTTTTGGAAGCGAAAGGAGAGAATGATGAGGAATTGACGGACGAAGATGTTGCAGATATGTTGTTAATGCTTCTCTTTGCTGGTCATGAAACTACAGCAATGGCTTTGACTTCTTCAATTTTACATCTTACAAGACATCCACAAGTGTTTGCAAAAGCCAAGAAAGAGCAAGAAGAAATTGTGAAGGCAAGACCATCGTCTCAAAAACAATTAAGTCGTACGGAATTTAAGAAAATGCTTTATCTTTCCCAGGTAATTGATGAAATGTTACGTCGTACCAATATTGCATTTTCTCTTTTTCGTGAGGCAACTAAAGACGTTAATATCAATGGTTATATTATACCAAAAGGGTGGAGAGTTCTGGTTTGGTTAAGAGCTATTCATATGAATCCTAAATATTATCCAAATCCAGAAGAATTTAATCCATCAAGATGGGATGGCAACAATTCTAGGGCAGCAACCTTCCTTCCTTTTGGAGCTGGAACTAGGCTTTGTCCAGGAAATCATATTTTCAAATACGAAATTTCCATATTTTTACACTATTTTCTACTAAATTACAAGTTGGAGGAAACAAGTCCAGAAGGTCCTGAAGCTGTCTTCCCATTCTCTCAGCCACAAGACTTAGCTAAGCTCATAAAGCTCTCTAAATAA 1476 0.3774 MGLSWVWMIVATLLACYIFVKKIVRKSNEWYYDMKLGNKHGLLPPGHMGWPLIGNIIPFIKYFNSGHPDSFINNLVSKYGESGIYKTHLLGKPSIIICTPEMCKRVLNDDDNFKQGYPKSTSELLKSKALTNVCSTEHKGLRELVSSGILGQKVLAMNLEIVEKIVINSLEELSRMEQPVQVFKEMEKISFEVIAHILMGSHIHSNIEKLTELFHQFSKCNPIYSLPINFPGFPFHQGLKVRKKLLKAIESIVGERRSMMKMVKKGENKKDLIELVLEAKGENDEELTDEDVADMLLMLLFAGHETTAMALTSSILHLTRHPQVFAKAKKEQEEIVKARPSSQKQLSRTEFKKMLYLSQVIDEMLRRTNIAFSLFREATKDVNINGYIIPKGWRVLVWLRAIHMNPKYYPNPEEFNPSRWDGNNSRAATFLPFGAGTRLCPGNHIFKYEISIFLHYFLLNYKLEETSPEGPEAVFPFSQPQDLAKLIKLSK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00688 491 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PANTHER CYTOCHROME P450 26 41 468 - -
Viun10g00688 491 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Viun10g00688 491 SUPERFAMILY Cytochrome P450 43 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00688 491 Pfam Cytochrome P450 44 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00688 Viun-Chr10 6980073 6991231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00688 3 488 Cytochrome P450 AT2G32440 41.667 1.09e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00688 K04123 K17875 vra:106773832 869.766