Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00687 ATGGAGTTAAGTTGGGTTTGGATGATTGTTGCTACTTTCTTGGCATGTTACATTTTTGTAAAGAAAATAGTGAGAAAGTCGAATGAGTGGTATTATGATATGAAATTAGGAAACAAACATGGCTTATTGCCTCCTGGTGATATGGGTTGGCCTCTTATTGGAAACATAATTCCCTTCATCAAAGATTTCAACTCTGGTCATCCTGATTCATTCATCAACAACTTACACTCTAAATATGGAGAAAGTGGTATCTACAAAACTCATTTGATTGGAAAACCAAGCATCATCATTTGCACACCTGAGATGTGCAAGAGAGTGTTGAATGATGATGAAAACTTCAAGCATGGTTATCCAAAATCCACCACTGAGTTGTTGAGAAACAAGCCTTTGATCAATACATGTAATGCAGAACACAAGGGTTTGAGAGAGCTGGTGAGTTCTGGAATTTTGGGTCACAAAGTGTTGGCCATGAACCTAGAACTTGTGGAGAAGATAGTGATTAATTCACTGGAAGAATTATCCAGAATGAAGCAGCCAATTCAGGTATTCAAAGAGATGGAAAAGGTTTCCTTTGAAGTCATTGTTCATATCTTGATGGGTTCTTACACTCATTCCAACATTGGAAAGTTGAGAGAGTTGTTTCACCAATTCTCCAAATGCAATCCCATTTATTCTCTTCCTATTAACTTCCCTGGTTTTGCTTTCCATCAAGGACTCAAGGTGCGGAAGAAGTTGTTGATAGTAATCGAATCGATTGTGGGTGAAAGAAGGTCAACAATGAAAATGGTAAACAATGGAGAAAATAAGAAAGATCTTATTGAGCTTATTTTGGAAGCGAAATGGGAGAATGATGAAGAATTGAAGGACAAAGATGTTGCAGATATGTTGCTAATGCTTCTCTTTGCTGGCCACGAAACCACTGCAATGGCTTTCACTTCCTCAATTTTATATCTCACAAGACATCCACAAGTGTTTGCAAAAGCCAAGGTAATTGATGAAATGTTACGTCGTACCAATATTGCATTTTCTCTTTTTCGTGAGGCAACTAAAGATGTCAATATTAATGGTTATATCATACCAAAAGGGTGGAGAGTTCTGGTTTGGTTAAGAGCTATTCATATGAATCCTAAATATTATCCAAACCCAGAAGAATTTAATCCATCAAGATGGGATGAAAACAATGTTAGGGCAGCAACCTTCCTTCCTTTTGGAGCAGGATCTAGGCTTTGTCCTGGAAATAACATTTTCAAATACGAAATTTCCATATTTTTACACTATTTTCTACTAAATTACAAGTTGGAGGAAACAAGTCCAGAAGGTCCTGAAGCTGTGTTCCCTTTCTCTCAGCCAAAAGACTTAGCTAAGCTCATAAAGCTCTCTAAATAA 1386 0.3716 MELSWVWMIVATFLACYIFVKKIVRKSNEWYYDMKLGNKHGLLPPGDMGWPLIGNIIPFIKDFNSGHPDSFINNLHSKYGESGIYKTHLIGKPSIIICTPEMCKRVLNDDENFKHGYPKSTTELLRNKPLINTCNAEHKGLRELVSSGILGHKVLAMNLELVEKIVINSLEELSRMKQPIQVFKEMEKVSFEVIVHILMGSYTHSNIGKLRELFHQFSKCNPIYSLPINFPGFAFHQGLKVRKKLLIVIESIVGERRSTMKMVNNGENKKDLIELILEAKWENDEELKDKDVADMLLMLLFAGHETTAMAFTSSILYLTRHPQVFAKAKVIDEMLRRTNIAFSLFREATKDVNINGYIIPKGWRVLVWLRAIHMNPKYYPNPEEFNPSRWDENNVRAATFLPFGAGSRLCPGNNIFKYEISIFLHYFLLNYKLEETSPEGPEAVFPFSQPKDLAKLIKLSK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00687 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Viun10g00687 461 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 SUPERFAMILY Cytochrome P450 43 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 Pfam Cytochrome P450 329 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 Pfam Cytochrome P450 44 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 Gene3D Cytochrome P450 35 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00687 461 PANTHER CYTOCHROME P450 26 41 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00687 Viun-Chr10 6949786 6957243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00687 20 458 Cytochrome P450 AT2G32440 39.490 1.22e-126 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00687 K04123 K17875 vra:106773832 800.816