Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00685 ATGGCTGAGAAATATGACATTATATCCAAGGACACAATAAAGCCATCTTCCCCAACCCCTAATCATCTTCACCACTTCAAACTCTCCTTCCTCGACCAATTGGCTCCTTCATTCCGTGTTCCAATTCTCCTCTTTTACTCTGCCTCTGATGTTAGAACCTTTGCCACTGACCTCACTGCACTCTCACAAAAGTTGAAAACTTCTCTGTCACAAGTCCTCACTCTCTATTACCCATTTTGTGGAAGACTCAGAGACTCTTCAATCATCGAGTGCAACGACGAGGGTGTTCTTTTCATCCACTCTAAACTCCCCATTGAGCTCTCAAACATTCTCAAAAACCCTCAACTTCACACCCTCTATGAACTTCTCCCATGTCCTCCTTACAACCTTGAACCACAACAAAGTGACACGTCGGGGATCATGGCAGTTCAGTTGAACCAATTCAAGTGTGGGGGCATAGCACTTGGCGTGTGCTTCTCACACAAGATTGCTGATGCTTCAACTGCAGCATCGTTTCTCAACGCTTGGGCTGCAACATCACGTGGACACGGCACTAACAACCTCGTTCCGCCTCCTTTGGAACAGACAAGCCTGCTTTTCCCACCGAGGAACATATCTGTCGACTTGACAAGTGGCTTGGTCGGCCAAGAAAAAACCGTGACAAAGAGACTCATGTTTAGTGGCAGCAGTATTTCTAGATTGAGACAAACCATCGCGTGCCCCGGTTTCAATCCCTCACGCGTTGAAGCCGTGACGACGCTGCTATGGAAATCATCACTTGAAGCAGCAAAAGAAAGTTTAGACTCTGGGGAAGAAAAAATTGTGGCTTCTGCAGTATCCCACACTGTGAACATTCGCAGCAGAATGGTTCCATCTTTGTCGAAGCATTCGGTTGGAAACATTTGGCAATACGCTTTGTCTTCGTTGGTGGAAGCGGAGGGGGTAGTGGGGTTGCGTGATTTGGCAGAGAGAATGAGAGAAACGATAGGAAAAGTTGATGGAGATTACATAAAGAAACTTCAGAGTGATGAGTTTGTTGAAGTAGTTCAGACTATAGAAGAAGCAAGAAGAGTGGTTGCAGAAAAGGGTATTGAAGGTTATGGGTTTACCAGTTGGGTAGGGTTTGAGTTCTATGAAGTTGATTTTGGATGGGGAAAGCCAAGTTATGCTACCACCATTGCTGTGCCCATAAAAAATTTTGGAATTTTGATGAGCACAAAGGATGGAGATGGCATAGAAGCATGGCTTACCTTGACCGAACGTGAAATGGCTCGGCTTGAGTACAATGCAGAACTTCTGAACTTTGCTTCGTTTGATTCTTAG 1323 0.4535 MAEKYDIISKDTIKPSSPTPNHLHHFKLSFLDQLAPSFRVPILLFYSASDVRTFATDLTALSQKLKTSLSQVLTLYYPFCGRLRDSSIIECNDEGVLFIHSKLPIELSNILKNPQLHTLYELLPCPPYNLEPQQSDTSGIMAVQLNQFKCGGIALGVCFSHKIADASTAASFLNAWAATSRGHGTNNLVPPPLEQTSLLFPPRNISVDLTSGLVGQEKTVTKRLMFSGSSISRLRQTIACPGFNPSRVEAVTTLLWKSSLEAAKESLDSGEEKIVASAVSHTVNIRSRMVPSLSKHSVGNIWQYALSSLVEAEGVVGLRDLAERMRETIGKVDGDYIKKLQSDEFVEVVQTIEEARRVVAEKGIEGYGFTSWVGFEFYEVDFGWGKPSYATTIAVPIKNFGILMSTKDGDGIEAWLTLTEREMARLEYNAELLNFASFDS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00685 440 Gene3D - 3 208 IPR023213 -
Viun10g00685 440 PANTHER F21J9.9 6 437 - -
Viun10g00685 440 Gene3D - 216 435 IPR023213 -
Viun10g00685 440 Pfam Transferase family 6 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00685 Viun-Chr10 6912659 6913981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00685 4 427 Monolignol Biosynthesis Gene Families AT5G48930 23.451 7.86e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00685 - K13065 gmx:100792323 553.518