Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00668 ATGGACTCCCTTTCACAACCAGCACTTGTGGTAGTGATAGCCATAACCATAATTCTTCTCTACAACACATGCAGGAAGCAAAAGGGTGGTCACAAAACGAAGGGTAGAGAACCCCCAGAACCCTCGGGTGCCCTACCTTTGATTGGTCACCTCCACCTGTTAGGTGCCCAGACACCCCTCGCTAGGACCTTTGCTGCTTTGGCCGACAAATATGGCCCCATCTTTGGAATCCGTCTAGGGGCATACCCTGCGCTTGTGATCTGCAACCAAGAGGCCATAAAAGAGTGCTTCACGACCCTTGATAAGGTCCTGGCCTCACGCCCTAAGAGTAGCCATGGTGTGCTTCTTGGTTACAATTTTGCAGGGTTTGGATTTGCGCCTTATGGCGCGTACTGGATCAAGATCAGAAAGCTCATCATGCTTGAATTGCTCTCTGCTCGCCGCCTCGAATTCCTGAGGCATGTTTATGAGTCTGAGATTGATACTTTGGTGAAGGATCTCGGGATGTATGTTGGAGGTAAAACTGATGTTAAAGTCACTATAAGTGAGTGGATGGAACGCTTGAGCTTCAACATCGTCACCAAGATGATCGCTGGGAAAAGGTATTTCAGTTATTTGGAAGATGTGGATGATGTAGAAGCACATGGTATTGTGAAACTTATAAAGGAGTTCATGCATATATCTGGGGAGTTTGTTCCCTCAGATTTGATTCCTGTTCTTGGATGGTTTGGGGTGCAAGGGAAAGTGCTGAAATCCATGAAACGAATTGCAAAAGATTTGGACAACCTTGTGGGAGGTTGGGTTGAAGAACATAAGAAAATTGATTCCCTCAATAACAAGTCATTGGAGAAACATGATTTCATTGATGTAATGCTCTCTGCTATTCAAGATGATCCTCTCTCTCATCATGACCGTGATACTATCATCAAAGCTAATGTTGCGAATCTGATGTTAGCGGGATCAGACACGACATCAACCGCAATGACATGGATACTGACGATGTTGGTGAAGAACCCAGAGGTGTTGCAGCGAGCACAGGAAGAGATTGAAGACGAAGTGGGAAGGGAGAGAAAGGTGGAAGCAACTGACATAAAAAACCTAATTTATCTGCAAGCAATCGTGAAGGAAACGCTGAGGCTATACCCTCCAGGGCCTCTGCTGGTGCCCCACGAGGCTACACAAGACTGCTACATTCAAGGGTATCATGTACCCAAAGGCACACGTGTGTTTGCGAACGTGTGGAAGCTTCACAGAGATCCTAGTGTCTGGTCGGAGGCTGAGAAGTTTTCACCGGAGAGGTTTGTGAATGAGAATGGAGAAGTTGTTGATGAAGGTCATCAGCATTTTGAGTATTTGCCCTTTGGGTCAGGGAGAAGGGCTTGCCCTGGTTCAACTTTTGCAACACAGGTTACTCTCATTACGATTGCTCGTTTGCTTCAGGCCTTTCGTTTGGAGGTGCCTGTGGATGAACCTGTTGATTTGGAAGAAGGGTTGGGCATCACCTTGCCCAAGATCAACCCTTTGCAGATTCTCTTGAGCTCTAGGTTACCTAATCAGTTTTATAACTCAGACAAATTGTAG 1581 0.463 MDSLSQPALVVVIAITIILLYNTCRKQKGGHKTKGREPPEPSGALPLIGHLHLLGAQTPLARTFAALADKYGPIFGIRLGAYPALVICNQEAIKECFTTLDKVLASRPKSSHGVLLGYNFAGFGFAPYGAYWIKIRKLIMLELLSARRLEFLRHVYESEIDTLVKDLGMYVGGKTDVKVTISEWMERLSFNIVTKMIAGKRYFSYLEDVDDVEAHGIVKLIKEFMHISGEFVPSDLIPVLGWFGVQGKVLKSMKRIAKDLDNLVGGWVEEHKKIDSLNNKSLEKHDFIDVMLSAIQDDPLSHHDRDTIIKANVANLMLAGSDTTSTAMTWILTMLVKNPEVLQRAQEEIEDEVGRERKVEATDIKNLIYLQAIVKETLRLYPPGPLLVPHEATQDCYIQGYHVPKGTRVFANVWKLHRDPSVWSEAEKFSPERFVNENGEVVDEGHQHFEYLPFGSGRRACPGSTFATQVTLITIARLLQAFRLEVPVDEPVDLEEGLGITLPKINPLQILLSSRLPNQFYNSDKL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00668 526 Pfam Cytochrome P450 38 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 FunFam Cytochrome P450 82C4 28 513 - -
Viun10g00668 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 PANTHER CYTOCHROME P450 82C3-RELATED 14 521 - -
Viun10g00668 526 SUPERFAMILY Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 Coils Coil 342 362 - -
Viun10g00668 526 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00668 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00668 Viun-Chr10 6562421 6567463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00668 39 521 Cytochrome P450 AT4G31940 46.138 1.91e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00668 - - gmx:100790675 837.795