Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00631 ATGAAGCGTTTCTCTCTTTTGTTTTGGTTTATATATGTTCCCCTGCTTTTCCACTCTACATGCAACTCCAAACACACTGTTTTTGCTTCAGAAAGTGAGATCGATCATATGGCACTTATCAAATTCAAAGAATCAATATCGAGTGACCCAAATGGAATCTTGGTTTCTTGGAACACTTCAATTCACTTCTGCAATTGGTATGGAATCACATGCCATCCCACACTTGGAAGGGTTACTGAGCTGAACTTGCAAGGGCACATGTTGAAAGGGTATATATCTCCTCATATAGGTAATCTCTCTTACACGAGAAGATTTGAACTTGCAAACAACAGTTTCTATGGCAATATCCCACTAGAAGTGGGAAGATTGTCCCAATTGCAGATATTTGATGTTCAAAATAACACATTGGTAGGAGAAATTCCTTTGAATTTGACACATTGTACTCAGCTCAGAAGTTTATATTTGTATGGAAACAATCTGAAGGGAAGAATACCTACTGAAATCGGATTGCTCCGGAACATTCAGTTTTTGAACTTTGGTCAAAACCAGTTAACAGGACAAATTCCATCTTCCATCGGGAATCTTTCTTCAATAACAGAACTCTTTCTTAATAATAACATCTTAAAAGGAGAAATTCCACAAGAAATATGTCATCTCAAAAGCTTGGTGATTGTAGCTTTAGGTATTAACAATCTGAGTGGATCATTTCCCTCCTGTCTTTACAATGTGTCATCTCTTATTCGAATTAATTTAGTGGAAAATCAATTTAGTGGCCCTCTTTCACCCAACATGTTCCACTCCCTCCAAAATCTCCAAGTACTTTTCCTTGCTAACAACAAATTCTCAGGTCCAATCCCACCTTCCATTGCAAATGCATCCAGTCTTTCAATCCTTGGTCTCTCTTTAAACCGTTTTGTGGGAAGAGTTCCAAGTCTTGGAAAACTACAAGATCTTTATCACCTAAATTTGGCTTATAACAATTTAGGTCATTTGCCAAATTCTTTGGGAAATTTGTCCACCCAACTAAGTAAAATATATCTCGGAAACAATGAGATATATGGAGAAATCCCTGAGGCAATAGGAAATTTAGTTGGCTTAACTCTCTTGACAATGTTTAATAACCACGTTGATGGGATTATCCCAACAACTTTTGGGAAGTTAACAATGCTTCAAGCGTTAAGCTTACTGGGAAACAAGTTATCTGGAAAGATAGAACCCTGCATTGGAAACTTAAGTCAATTGTTTCATTTGGACCTACGCGCAAATCGGTTCGAAGGGAGTATTCCTCCAAGTATAGGAAATTGTCAAATGCTACATCATTTAGATCTTTCACTGAACAATCTCACAGGAACCATTCCACCAGAGCTTTTTAATCTTTCCTCTCTATTTAGCAAGTTCGATTTGTCACGTAACTCATTGAGTGGTAGTATACCAGATGAAGTGGGAAATATACACAATATTATCTTTCTAGATATGTCAAACAATCATATATCTGGTCACATTCCTCTTGGTGTTGGAAAATGCGTAATGTTAGAGTACCTCTTTTTGCAAGGGAATTCTTTACAAGGAGTCATACCATCTTCTTTGGCATCACTTAAAAGCATTACAGTTTTGGACCTCTCACAAAACCATTTGTCTGGATCAATTCCAAATTTCCTGCAAAACCTTTCTTTCTTGCAGTATTTGAATGTATCTTTTAACGTATTGGAAGGTGAAGTACCCACTAAAGGTGTCTTTGGAAATGTAAGTGTATTGGTGGTGAATGGAAACAGTAAGCTTTATGGAGGTATTTCTGAATTGCATCTACCACCATGCCCTGTTAAAAGTGAGAAACATGCAAAACACCACAAATTCAGATTGATAGTGGCGATATTAAGTGTAGTTGTTTTTCTCATTGTACTATCATCTACCTTTGCTATCTATTGGTCGAGGAAAGAGGGGAAGAAACCTTCCCTTAATTCATCAACAATTGACCAACTGGCTAAAGTTTCCTACCAAAGCTTGTACAATGGAACTGATGGGTTCTCAACTACAAACTTGATAGGGTGTGGGAATTTCAGTTCTGTCTACAAAGGAACTCTTGAGCTCCAAGACAGAGTTGTTGCCATAAAGGTTCTAAACCTGCAAAGAAAAGGAGCTCACAAGAGCTTCGTGGCCGAATGTAATGCACTCAAAAATATTAAACATCGAAATCTTGTTCAGATTTTGACATGTTGTTCCAGCACAGATTATAAAGGTCAGGAATTCAAAGCTTTGATCTTTGAGTACATGAGAAATGGAAGCTTAGAGCAATGGTTGCATCCTACCACAACAAGTGTTGAGCAGCCAAGAACATTGAGCCTTAAGCAAAGATTAAGTATCATGATTGACGTAGCTTCTGCATTACAATATCTTCATCATGAATGTGAGCAACCGATCATTCATTGTGATTTGAAGCCAGGCAATATCCTTCTTGATGATGACATGATTGCTCATGTAAGTGATTTTGGCATAGCAAGACTTCTCTCAACAACCAAAGGTATTACCTCCAAACAATCAAGTACATTTGCAATAAAGGGGACCGTTGGCTATGTTGCTCCAGAGTATGGAGTGGGTGCTGAAGTGTCAACTTATGGCGACATGTTCAGCTTTGGAATTCTGATGTTGGAAATGCTTACCGGGAGAAGACCAACAGATGAAATGTTTGAAGATGGTCAAAATATTTGTAACTTCGTTGCAATTTCATTTCCCAGTAAACTTTTTCAAATTTTAGATCCGCGACTTATTCCAATTGAGGAAAATGATTGGAATCTGAATCCAGATGTTGAGAAGTGCCTAGTTTCACTTTTTAGGATTGGACTTGCCTGTGCCATGGAATCACCAAAAGAAAGAATGGATGTGGTTGATGTCAGCAGGGAGCTTCATCAAATTAAAAAAGCTTTTGCTAGTTGTTGTGCTTGGAAATGA 2946 0.3781 MKRFSLLFWFIYVPLLFHSTCNSKHTVFASESEIDHMALIKFKESISSDPNGILVSWNTSIHFCNWYGITCHPTLGRVTELNLQGHMLKGYISPHIGNLSYTRRFELANNSFYGNIPLEVGRLSQLQIFDVQNNTLVGEIPLNLTHCTQLRSLYLYGNNLKGRIPTEIGLLRNIQFLNFGQNQLTGQIPSSIGNLSSITELFLNNNILKGEIPQEICHLKSLVIVALGINNLSGSFPSCLYNVSSLIRINLVENQFSGPLSPNMFHSLQNLQVLFLANNKFSGPIPPSIANASSLSILGLSLNRFVGRVPSLGKLQDLYHLNLAYNNLGHLPNSLGNLSTQLSKIYLGNNEIYGEIPEAIGNLVGLTLLTMFNNHVDGIIPTTFGKLTMLQALSLLGNKLSGKIEPCIGNLSQLFHLDLRANRFEGSIPPSIGNCQMLHHLDLSLNNLTGTIPPELFNLSSLFSKFDLSRNSLSGSIPDEVGNIHNIIFLDMSNNHISGHIPLGVGKCVMLEYLFLQGNSLQGVIPSSLASLKSITVLDLSQNHLSGSIPNFLQNLSFLQYLNVSFNVLEGEVPTKGVFGNVSVLVVNGNSKLYGGISELHLPPCPVKSEKHAKHHKFRLIVAILSVVVFLIVLSSTFAIYWSRKEGKKPSLNSSTIDQLAKVSYQSLYNGTDGFSTTNLIGCGNFSSVYKGTLELQDRVVAIKVLNLQRKGAHKSFVAECNALKNIKHRNLVQILTCCSSTDYKGQEFKALIFEYMRNGSLEQWLHPTTTSVEQPRTLSLKQRLSIMIDVASALQYLHHECEQPIIHCDLKPGNILLDDDMIAHVSDFGIARLLSTTKGITSKQSSTFAIKGTVGYVAPEYGVGAEVSTYGDMFSFGILMLEMLTGRRPTDEMFEDGQNICNFVAISFPSKLFQILDPRLIPIEENDWNLNPDVEKCLVSLFRIGLACAMESPKERMDVVDVSRELHQIKKAFASCCAWK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00631 981 FunFam LRR receptor-like serine/threonine-protein kinase EFR 311 611 - -
Viun10g00631 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 192 - -
Viun10g00631 981 ProSitePatterns Protein kinases ATP-binding region signature. 681 704 IPR017441 GO:0005524
Viun10g00631 981 PANTHER OS04G0122200 PROTEIN 218 972 - -
Viun10g00631 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Viun10g00631 981 SUPERFAMILY L domain-like 33 328 - -
Viun10g00631 981 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 757 979 - -
Viun10g00631 981 Gene3D Phosphorylase Kinase; domain 1 655 756 - -
Viun10g00631 981 Pfam Protein kinase domain 677 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00631 981 ProSiteProfiles Protein kinase domain profile. 675 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00631 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 215 309 - -
Viun10g00631 981 Gene3D Transferase(Phosphotransferase) domain 1 757 977 - -
Viun10g00631 981 Gene3D Ribonuclease Inhibitor 329 614 IPR032675 -
Viun10g00631 981 Gene3D Ribonuclease Inhibitor 27 92 IPR032675 -
Viun10g00631 981 Gene3D Ribonuclease Inhibitor 93 328 IPR032675 -
Viun10g00631 981 Pfam Leucine rich repeat N-terminal domain 38 71 IPR013210 -
Viun10g00631 981 FunFam LRR receptor-like serine/threonine-protein kinase EFR 646 756 - -
Viun10g00631 981 SMART LRR_typ_2 411 435 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 532 555 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 556 581 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 171 195 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 363 386 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 123 147 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 315 338 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 436 459 IPR003591 -
Viun10g00631 981 SMART LRR_typ_2 268 292 IPR003591 -
Viun10g00631 981 SMART serkin_6 675 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00631 981 SUPERFAMILY L domain-like 339 593 - -
Viun10g00631 981 Pfam Leucine rich repeat 221 281 IPR001611 GO:0005515
Viun10g00631 981 Pfam Leucine rich repeat 511 569 IPR001611 GO:0005515
Viun10g00631 981 SUPERFAMILY Protein kinase-like (PK-like) 650 967 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00631 Viun-Chr10 6019310 6023235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00631 33 981 Receptor kinase-like Gene Family AT3G47570 42.900 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun10g00631 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00631 - - vun:114166412 1522.29