Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00629 ATGTCTTCATCGTCGAAACTCCAACGGAGGTACGATGTGCTAATCAACTTTAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCAGCCCTCTCTACTGTTGGCTTCACCACCTTCCTTCACGAGGAGAACACAATGAAGGGAATGAACATCCAAGAACCTATTCTCAATCTCTGTCGGGTAGCAATAGTTGTTTTCACCAAAACATATTCTCAATCTTCTTGGTGTCTTAATCAGCTTCAACAAATCATTAAATGGAACGAAACTTATTGTCGACATGTTCTGCCCGTATATTACGAAATCCAGCCATCTGATGTGCGTCTTCAAAAGGGTGATTTTGGAAAAGCCCTGGAGGTAACTGCACAACAAACATTTTCCGGACACCACCAGGAGCGTGGCATGTCCAAGTGGAGCCAAGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGCGATGCTGAACTAGTTGAGAAAATCGTTAAGAGCGTTCTTAATTTACCAATCTTGTCTGCTACTAAATTTCCAGTCGGATTACATTCCCGCGTGGAAAAAGTGATCGGAACTATCAAAAATAATTCCACCAAAGTTTGTATAATAGGGATATGTGGAGAGGGAGGATCTGGTAAAACCACCCTTGCCAGAGCCATCTACCATCAAATTCAGCTTAGATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAAGTTGGCGGAATAAAAGGGGATCTTCGTTTACGAGAACAACTTCTTCTAGATATCCTAAAAACAAAGGTGGAGATACCTAGTGTTGATATGGGAAGAAGTATGATTCGGGAAAGACTATCTGGGAAAAGGATGCTCATTGTACTTGACGACGTTCCTTACTGTAGTATATTATTAGACCTATGGGATCGATTTAAATGGTTGGGTGGAGGAACTGTAGTAATCATTACAACAAGAGATGAAAGCATCCTGACGATACCTCAAGGTTATTCTGTTTTTCGAACAAAGCTAATGAATGCAAAGGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGGGAAGCAAAACCAAAAGAAGAATACTATGGCCTTGCGAAAAGAGTAGTTCATAATTGTGGAGGACTACCTCTAGCACTTGAAGTCATTGGAAGTACTTTATTTGAAAGGACAAAATACATATGGCATAGTGTACTGTTTAAATTAGAGAAAATTCCCCGATACAATGTTATTGAGAAACTGAAAATAAGCTTCGACAGTTTAAGCAATCAGATGGAAAGATATATATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAGGGCATAGCCTATGCGACGAAGATCCTAAATGGCTGTGGAGTAGAGGCTAATAATGGAATAAGAGTTTTGATTGAGCGTAGCCTTATAAAAGTTAAGAAGAACAACAAATGTGGAATGCATCCTTTACTACAAGAAATGGGAATAACACTTAGTCGTGAAATTTCACTAAAGGAACCTGGGGAAAACAGGCGACTATGGTTTCATAAAGATGAAAAATATGGGACAAAAGCCATGCACTGGTTGCCATTGAATCAAGATCAAGTACAACTGGCTGTAAATTCTGAGTACCTTTTCCAGAAACTGAGATGGATCAGTTTGCATGGGTTTTCTTCAGAATACCTACACAACAAATTTTATGTGCATGATGCAATAGCGATTGATTTGAAACACAGTCTTCTTCGACTCGTTTGGAAAGAACCCCAGGTTTTGAGGTCGCTAAAAGTCCTTAACCTCAGTCACTGCAAGTACTTAACAACAACTCCTGACTTTACGGGACTACAAAGTCTTGAACAACTCATTCTGAAATGTTGTCCAAGATTGCGCAAAGTACACCAATCTATTGGATGTCTCGGCAATCTTTTACTCCTAAATTTGAAAGACTGTACAAATCTAAGCAATCTCCCCAGAGGGATATACAAGTTGAAATCTCTAAAAACTCTCATTCTCTCTGGTTGTTCAAAGATTGACCTAATGGAAAAAGATACAGCGGAGATGGAATCCTTGATAACTCTGATCGCTGAAAATACAGCTGTAAAAGAACTACCTATTTCTATTGTAAGCTCAAAAAGCATTGGATACATATCCCTAGGTCGATTCGAGAGATTGTCACCAAATATTTTTCCTTCTGTTATTCGGTCTTGGATATCGCCAACAATGAATCCCATATCTTACATGCACTCGTTTTGCATGGATATAGAGGACAATAATTGGGATGATATTGCACCATTGCTTAGCACCCTTAGAAATCTTCGAAGTGTTTTGGTGTAA 2313 0.393 MSSSSKLQRRYDVLINFNGEDIHRKFVSHLDSALSTVGFTTFLHEENTMKGMNIQEPILNLCRVAIVVFTKTYSQSSWCLNQLQQIIKWNETYCRHVLPVYYEIQPSDVRLQKGDFGKALEVTAQQTFSGHHQERGMSKWSQALTKAANFFGWDESNHRSDAELVEKIVKSVLNLPILSATKFPVGLHSRVEKVIGTIKNNSTKVCIIGICGEGGSGKTTLARAIYHQIQLRFTEKSFIEDIGQVGGIKGDLRLREQLLLDILKTKVEIPSVDMGRSMIRERLSGKRMLIVLDDVPYCSILLDLWDRFKWLGGGTVVIITTRDESILTIPQGYSVFRTKLMNAKESLELLSWHAFREAKPKEEYYGLAKRVVHNCGGLPLALEVIGSTLFERTKYIWHSVLFKLEKIPRYNVIEKLKISFDSLSNQMERYIFLDVCCFFVGKGIAYATKILNGCGVEANNGIRVLIERSLIKVKKNNKCGMHPLLQEMGITLSREISLKEPGENRRLWFHKDEKYGTKAMHWLPLNQDQVQLAVNSEYLFQKLRWISLHGFSSEYLHNKFYVHDAIAIDLKHSLLRLVWKEPQVLRSLKVLNLSHCKYLTTTPDFTGLQSLEQLILKCCPRLRKVHQSIGCLGNLLLLNLKDCTNLSNLPRGIYKLKSLKTLILSGCSKIDLMEKDTAEMESLITLIAENTAVKELPISIVSSKSIGYISLGRFERLSPNIFPSVIRSWISPTMNPISYMHSFCMDIEDNNWDDIAPLLSTLRNLRSVLV 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00629 770 PRINTS Disease resistance protein signature 207 222 - -
Viun10g00629 770 PRINTS Disease resistance protein signature 375 389 - -
Viun10g00629 770 PRINTS Disease resistance protein signature 583 599 - -
Viun10g00629 770 PRINTS Disease resistance protein signature 282 296 - -
Viun10g00629 770 SMART AAA_5 204 346 IPR003593 GO:0016887
Viun10g00629 770 CDD AAA 185 340 - -
Viun10g00629 770 Pfam NB-ARC domain 190 410 IPR002182 GO:0043531
Viun10g00629 770 SMART till_3 10 150 IPR000157 GO:0007165
Viun10g00629 770 SUPERFAMILY L domain-like 525 765 - -
Viun10g00629 770 Gene3D - 173 332 IPR027417 -
Viun10g00629 770 SUPERFAMILY "Winged helix" DNA-binding domain 412 512 IPR036390 -
Viun10g00629 770 Gene3D - 3 172 IPR035897 -
Viun10g00629 770 Gene3D - 341 424 IPR042197 -
Viun10g00629 770 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Viun10g00629 770 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Viun10g00629 770 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 686 IPR044974 GO:0006952
Viun10g00629 770 Gene3D Ribonuclease Inhibitor 514 770 IPR032675 -
Viun10g00629 770 Pfam TIR domain 11 172 IPR000157 GO:0007165
Viun10g00629 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00629 Viun-Chr10 5973448 5976651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00629 9 700 WRKY Transcription Factor Family AT4G12020 26.954 6.89e-57 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00629 - - vun:114167063 1513.05