Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00628 ATGACCTCTCATCAATTTCTTTCCATGGATAACGCCTCCTCCTCATCCTCCAAACTCCCACAGAAGTACGATGTGTTAATCAACTGTACTGGAGAAGACATCCGTAGGAAATTTGTTTCTCATCTTGATTCTGCCCTCTCTACTGCTGGGCTCACTACTTTCCTTCACCACCAGAATGCAACCAAGCCAACGCACATCCAACAACCTATTCTCAACCTCTGTCGGGTAGTAATTGTTGTTTTTACCAAAACCTATTCTGAGTCTGCTTGGTGTCTTCTTCAACTTCAACAAATCATCAAATGGCACGAAACTTATTCCCGATATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAAGAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTTTCAGCACAACAATTGGATCATGGCATGTCCAGCTGGAGCCACGCACTCACCAAAGCTGCAAATTTTTTTGGATATGATGAGAGCAATTACAGGAGTGATGCTGAAGTTGTGGACAAAATTGTTAAGAACATTCTTAATTTATCAGTCTTGTCTGCAACTAAATTTCCAATTGGATTACCATCCCACGTAGAAGATCTGATTCAAACTATAAAATGTAAATCCGCGGAAGTTTGTACAATAGGGATATGTGGAGAGGTAGGATACGGTAAAACCACTCTTGCCAAAGCCATCTATAATCAAATTCATGGTATATTCGCTGAGAAAAGTTTCATCGAAAATATTTCACAAGTTATTCAAACAAGAGGGTATGCTAAGTTACAAGAAAAACTTCTTTCGGATGTCCTTAACACAAAGGTGGAGATACAGGACGTTGATATGGGGAGAAGAATGATTCAGGATAAATTTTATGGGAAACGATTGCTCATTGTACTTGACGATATGAATGAGAGCGGTCCATTTTTAGAGCTATGCACATATCGTGCTAGGTTCAGTGGAGGAACTGTAATAATCATTACAACAACAGATGAACGCATACTCAGGACATATGCAGTTGATTCTGTATTTCAGATAAAGCTAATGAACGAAAAGGAGTCTCTTGAGCTTCTTAGTTGGCACGCATTCAGTGAAGCAAAACCAAAAGAAGAATACAATGACCTTGCAGAAAGAGTAGTTAGTTATTGTGGAGGACTACCTCTAGCTCTTGAACTCATTGGAAGTACTTTATTTGAAAGGACGAAAGAAGAGTGGAATAGTGTATTGTTTAAATTTGAAAAAATTCCTCAGCACCATGTTGTGCACAAATTGAAAATAAGCTTTGACGGTTTGAAAAATCAAATAGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAGACAGAAGCTCTGCTACGAAGATCCTAAATGGCTCTGGAGTAGACGCTGATAGTGGAATAAGAGTCTTGATAGAGCGTAATCTCATAAAAGTTAAGAAGAACAACAAGATTGAAATGCATCCTTTGCTACAAGAAATGGGAATAAGAATTATTCGTGAAATTTCAATAATGGAACCTTGGAAGACCAATCAGTTGTGGTTTGACAAGGATGCAGAATATGCATTGATAGAGAATAAAGGGAAAAATGCCATGAAGTGGTTGCCTCTGAAACTGGATCAAGTAAAAATAGCTGTAAATTCTGAATACCTTTTACAGAAGCTGAGATGGATTAGTTTGCATGGGTTTCCTTCAGAGTACGTTCATAACAAATATTGTGTGCATGATGCAATAACGATTGATTTAAAACACAGTCTTGTTCGATTTGTCTGGAAAGCACCTCAGGTTTTGAGGTCGCTAAAAGTCCTTAATCTCAGTCACTCCAAGTACTTAACAATAACCCCTGACTTTACCGGACTACCAAATCTTGAACAACTAATTCTGAAGTATTGTCCGAGATTGTACATAGTACACCGATCTATTAGATGTCTTTGCAATCTTATACTGCTAAATTTGAAGAATTGTAAAAGTCTAACAAATTTCCCCACAGAGATATATGAGCTGAAATCTTTAAGAACTCTCATTCTCACTGGTTGTTCGGAGATTGACCTAATGGGAAATGATATAGCGCAGATGGAATCCTTGATAACTTTAATTGCAGAAAATACGGCTGTGAAAGAAGTGCCTTTTTCAATGGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGAATGGAGCGATTGTCACGTAATCTTTTTCCTTCTATCATTTGCTCTTGGATGTTGCCAACAGTGAATCGCACATCTTATATTCATTCATTTTTCATGGACACGAAGGATAATAGTTGGGATGATATTGCGCCATTGCTTAGCACCCTTAGAAATCTAAGAAGTGTTTTGGTGCAATGTGACTCTGAGTTTCAACTATCTAAGCAAGTAAAAAATATTCTGTCTGAAGATTTTGCAAATATTACAGAATCAGAAATTTCAAAGTTTCACACGGTGTCTTCTTTGATTGGTGTTGGAAGATACAACGCATTCTTCAATTCTGTCAACTATAGCATATCTGAGGTAATGACAAGCAGTGATTCTTGCGAAGTGTTTTATTGTTTGGCCCATATAGGCGAGGGACACTCGGTTTCTTTCTCTGTGCCTCAAGATCGTGACATGAAGGGAATGGCTTTTCGTGTTGTTTATTTATCAACCCATGAAATCATTGAACCTGAATTTACTACTCCCTTAATTGTTAATTACACAAAGTGTACATTCCATATACACAATCATGGTACAGTCATTTCCTTTAATGATGAAGATTGGCATGGCATAGTGTCAAATTTACGATGTGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTAATGGATTGGTGGTCAATAACACAGTGTTTTATCTTATATGTGGTGAATCACATAACTTCAGAAAAAGACTCTGA 2913 0.3759 MTSHQFLSMDNASSSSSKLPQKYDVLINCTGEDIRRKFVSHLDSALSTAGLTTFLHHQNATKPTHIQQPILNLCRVVIVVFTKTYSESAWCLLQLQQIIKWHETYSRYVLPVYYEIQPSDVRLQEGDFGKAFKATAHQTFSAQQLDHGMSSWSHALTKAANFFGYDESNYRSDAEVVDKIVKNILNLSVLSATKFPIGLPSHVEDLIQTIKCKSAEVCTIGICGEVGYGKTTLAKAIYNQIHGIFAEKSFIENISQVIQTRGYAKLQEKLLSDVLNTKVEIQDVDMGRRMIQDKFYGKRLLIVLDDMNESGPFLELCTYRARFSGGTVIIITTTDERILRTYAVDSVFQIKLMNEKESLELLSWHAFSEAKPKEEYNDLAERVVSYCGGLPLALELIGSTLFERTKEEWNSVLFKFEKIPQHHVVHKLKISFDGLKNQIEKDLFLDVCCFFVGKDRSSATKILNGSGVDADSGIRVLIERNLIKVKKNNKIEMHPLLQEMGIRIIREISIMEPWKTNQLWFDKDAEYALIENKGKNAMKWLPLKLDQVKIAVNSEYLLQKLRWISLHGFPSEYVHNKYCVHDAITIDLKHSLVRFVWKAPQVLRSLKVLNLSHSKYLTITPDFTGLPNLEQLILKYCPRLYIVHRSIRCLCNLILLNLKNCKSLTNFPTEIYELKSLRTLILTGCSEIDLMGNDIAQMESLITLIAENTAVKEVPFSMVSSKSIGYISLRGMERLSRNLFPSIICSWMLPTVNRTSYIHSFFMDTKDNSWDDIAPLLSTLRNLRSVLVQCDSEFQLSKQVKNILSEDFANITESEISKFHTVSSLIGVGRYNAFFNSVNYSISEVMTSSDSCEVFYCLAHIGEGHSVSFSVPQDRDMKGMAFRVVYLSTHEIIEPEFTTPLIVNYTKCTFHIHNHGTVISFNDEDWHGIVSNLRCGDKVEIFVSFGNGLVVNNTVFYLICGESHNFRKRL 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00628 970 PRINTS Disease resistance protein signature 219 234 - -
Viun10g00628 970 PRINTS Disease resistance protein signature 387 401 - -
Viun10g00628 970 PRINTS Disease resistance protein signature 294 308 - -
Viun10g00628 970 PRINTS Disease resistance protein signature 601 617 - -
Viun10g00628 970 Gene3D - 20 182 IPR035897 -
Viun10g00628 970 Gene3D - 183 347 IPR027417 -
Viun10g00628 970 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Viun10g00628 970 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 691 IPR044974 GO:0006952
Viun10g00628 970 Gene3D Ribonuclease Inhibitor 480 786 IPR032675 -
Viun10g00628 970 SUPERFAMILY "Winged helix" DNA-binding domain 425 525 IPR036390 -
Viun10g00628 970 Gene3D - 352 436 IPR042197 -
Viun10g00628 970 SMART till_3 22 162 IPR000157 GO:0007165
Viun10g00628 970 Pfam NB-ARC domain 202 420 IPR002182 GO:0043531
Viun10g00628 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 446 IPR027417 -
Viun10g00628 970 Pfam TIR domain 22 186 IPR000157 GO:0007165
Viun10g00628 970 SUPERFAMILY L domain-like 534 786 - -
Viun10g00628 970 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00628 Viun-Chr10 5953028 5956985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00628 15 718 WRKY Transcription Factor Family AT4G12020 26.435 6.41e-64 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00628 - - vun:114165880 1229.54