Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00614 ATGTCCAGGTGGAGTCATGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTCAAGGAGTTCTTAATTTACCAGTCTTGTCTGCAACTAAATTCCCAGTTGGATTACAATCCCACGTGGAAGATCTGATTCGAATTATAAAAAGTAAATCCATGACAGTTTGTAAAATAGGGATATGTGGAGCGGGAGGATCTGGTAAAACCACCCTTGCTAAAGCCATCTACCATCAAATTCAAGGTACATTCAGGAACAAAAGTTTCATTGAAGATGTTGGACAAGTTGGCGGAATAAGAGGGGATATTCATGTACAAGAAAAACTTCTTTTAGATATTCTGAAAACAAAGGTGAAGATTCCTAGCGATGATGTGGGAAGAACTATGATTTGGGAAAGACTTTATGGGAAAAGGGTGCTCATTGTTGTTGATGATGTGCCTAACTATTTTGAAATTTTAGCACTACGAAATTGTAGTCGTTGGTTCAGTGGAGGATCTGTAATAATGTTTACAGTAAGAGATGAAAGCCTACTGAAGCATTATTTACTTGATTCTGTATATCGGATAGAGCTAATGAACGCAAACAAGTCCCTTGAGCTTCTTAGTTGGCATGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAATGACCTTGCAAAAGCAGTAGTTGCTTATTGCGGAGGATTACCTCTGGCTCTTGAAGTCATTGGAAATAGTTTATTTGAAAGGACGAAAGAAAAATGGAATACTGTTTTATTTGAATTAAAGAAAATTCCTCCGCACAATGTTATAGAGAAATTGAAAATAAGCTTCAATGGTTTACGCAATGAGATGGAAAAAGAATTTTTCCTTGATGTATGTTGTTTCTTTATTGGCAAGGGCATAGCCTATGCTACGAAGATCCTAAATGGTTGTGGAGTAGACGTTGATACTGGAATAAGAGTTCTCATAGAACGTGGCCTCATAAAAGTTAAGAACAACAAATTTGGAATGCATCCTTTGCTACGAGAAATGGGAAGAGAAATTATTTGCGAAATTTCAGGAAAGGAATCTGGGAAGAACAGTGAACTGTGGTTTGATAAGGATGTAGAATATGCACTACCGGATAATACTCTCTTTTCATCAAAACAAACAAAAGTCATTCAGAGATTGCCTGTGAAAATGGTTTTAACCACAAAAGATTTCTTCGAACCTTATCTAAGTGACCGACAGCTGAAACTCGCTGAAAATCCTGAATACCTTTCTCAGAAACTGAGATGGATCACTTGGCAAGGGTTTTCTTCAGAATACCTACCTAACGACTTTTATTTGCATGACGCAATTGCGGTTGATTTAAAACACAGTCTTCTTCGACTTGTCTGGAAAGAACCCCAGGTTTTGAGGTCTCTAAAATTCCTTAACCTTAGCCACTCCATGCACTTGACAGAAACACCTGACTTTTCAGGACTACCAACTCTTGAACACCTCATTCTAAAAGATTGTCCGAGATTGTGCAAAGTACACCAATCTATTGGATGTCTACGTAATCTTATACTGCTAAATTTGAAGGACTGTGAATGTTTAAACAATCTCCCCCGTGAGATATATAAGTTGAAATCTTCAAGAACTTTCATTCTCTCTGGTTGTTCCATAATTGACCTAATGGAAAAAGATACAGTGCGAATGAAATCCTTGATAACTGTAATTACAGAAAATACAGTTGTGAAAGAAGTGCCTTTTTCAATGGTAAGCTCAAAACGCATTGGATATATATCTCTACGTGGATTGGAGGGATTGTCACATAATATTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAACAATGAATTCCATATCTTATGTTCATTCGTTTTGCATGGATATGGAGGATAATAGTTGGGATGATATTGTGCCATTGCTTAGCTCCCTTAAAAATCTTAGAAGTATTCTTGTGCAATGTGACACCGAGTTTCAACTATCTTTGCAATTGGAAACTATTTTGGCTGAATATGGTGTAAATATTATAGAATCAGGAATTTCAAAGCAGCACTTCAGGTCTTCTTTGATTGGTGTTGGAAGATACAATGAATTCTTCAGCACTGTCAGCGATAGCATATCTGAGGTATTAGTAAGTAGTGAGTCTTGTGATGTTTCTCTCGCAGCTGTCAACAATTGTTTGGCGCATATGGGTGAGGGACACTCTGTTTCTTTCACTGTTCCTCGAGATCGTAACTTGAAGGGAATGGCTTTTTGTGTTGTTTATTTATCAACTCCTAAAATCATTGAACCTGAATTTACTACTGTCGTAATTGTTAATTACACAAAGTGTACATGCCACATACACAACCATGGCACAATAATTTCCTTTAGTGATGAAGACTGGCGTGGAATAATGTCAAATTTAGAATATGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGCTCAAGAACACAGTTGTCTATCTGATATGTGGTAAATCACATAACTTGAAAAAAGAGCCTGAGTCAAAGAAAAATTGTCTCATTAGATTCATAAAGAAAGTTGTAATGTGTGACTTCTGGTAA 2598 0.3711 MSRWSHALTKAANFFGWDESNYRSDAELVDKIVQGVLNLPVLSATKFPVGLQSHVEDLIRIIKSKSMTVCKIGICGAGGSGKTTLAKAIYHQIQGTFRNKSFIEDVGQVGGIRGDIHVQEKLLLDILKTKVKIPSDDVGRTMIWERLYGKRVLIVVDDVPNYFEILALRNCSRWFSGGSVIMFTVRDESLLKHYLLDSVYRIELMNANKSLELLSWHAFREAKPKEEYNDLAKAVVAYCGGLPLALEVIGNSLFERTKEKWNTVLFELKKIPPHNVIEKLKISFNGLRNEMEKEFFLDVCCFFIGKGIAYATKILNGCGVDVDTGIRVLIERGLIKVKNNKFGMHPLLREMGREIICEISGKESGKNSELWFDKDVEYALPDNTLFSSKQTKVIQRLPVKMVLTTKDFFEPYLSDRQLKLAENPEYLSQKLRWITWQGFSSEYLPNDFYLHDAIAVDLKHSLLRLVWKEPQVLRSLKFLNLSHSMHLTETPDFSGLPTLEHLILKDCPRLCKVHQSIGCLRNLILLNLKDCECLNNLPREIYKLKSSRTFILSGCSIIDLMEKDTVRMKSLITVITENTVVKEVPFSMVSSKRIGYISLRGLEGLSHNIFPSIIRSWMSPTMNSISYVHSFCMDMEDNSWDDIVPLLSSLKNLRSILVQCDTEFQLSLQLETILAEYGVNIIESGISKQHFRSSLIGVGRYNEFFSTVSDSISEVLVSSESCDVSLAAVNNCLAHMGEGHSVSFTVPRDRNLKGMAFCVVYLSTPKIIEPEFTTVVIVNYTKCTCHIHNHGTIISFSDEDWRGIMSNLEYGDKVEIFVTFGHGLVLKNTVVYLICGKSHNLKKEPESKKNCLIRFIKKVVMCDFW 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00614 865 Gene3D - 205 288 IPR042197 -
Viun10g00614 865 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 590 IPR044974 GO:0006952
Viun10g00614 865 SUPERFAMILY L domain-like 418 657 - -
Viun10g00614 865 PRINTS Disease resistance protein signature 146 160 - -
Viun10g00614 865 PRINTS Disease resistance protein signature 471 487 - -
Viun10g00614 865 PRINTS Disease resistance protein signature 71 86 - -
Viun10g00614 865 PRINTS Disease resistance protein signature 239 253 - -
Viun10g00614 865 Gene3D - 41 198 IPR027417 -
Viun10g00614 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 298 IPR027417 -
Viun10g00614 865 Gene3D - 1 40 IPR035897 -
Viun10g00614 865 Gene3D Ribonuclease Inhibitor 334 674 IPR032675 -
Viun10g00614 865 SUPERFAMILY "Winged helix" DNA-binding domain 276 377 IPR036390 -
Viun10g00614 865 Pfam NB-ARC domain 53 270 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00614 Viun-Chr10 5764051 5768064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00614 49 560 WRKY Transcription Factor Family AT5G45050 27.911 1.33e-57 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00614 - - vun:114165880 1100.5