Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00589 ATGAAACATGCTTTTTCACTTTTACTGACTTGGTCGTTTTTCATCGAATTCAGTCAACCAATGCCTTCTTATTCATCTTCGTCATCCTTCTCAAAATCAAGATCAAAACCAAAATCAAAATCCCAGTGGACATACGATGTGTTTATCAATTTCCGGGGGGAAGACACTCGCAGGAATTTCGTTTCCCATCTCTATTCTGCCCTCAAAGACAGTGGAGTCAACGCTTTTCTGGACGATGAGAAGCTTGATAAGGGAGGAGACCTGAAGTCTGAACTGTTGCATGCAATAGAAGGGTCTCAAATAACCATCGTTGTTTTCTCCCAAAACTACATTCACTCTACATGGTGTCTTGATGAACTCCACAAAATCATGGAATGCAATGCTTTTAGAGGGCAAGTGGTTATGCCAGTGTTTTATGATATTGGCCCCTCGTTTTTGCGTGACACCCAACATATTTCTTTCGAAGTCATTTCTGACCAACATAGCAGGATAAAACAATGGAAGAAAGCATTGACACAAGCAGCAAATTTAGCAGGTTGGGATTTGAGAAATTACAGAAATGAAAATGATGTTATGAAGGAAATTGTTTGTGAAGTTTTGAAAAGACTGGATAGAACATACTTGTCTATCACAAACTTTCCAGTTGGACTAGAATGCCGTCTGCAGCATGGTATTGACTTCATTAGAAATAAAAAAATAGGAACCTGTATATTAGGGATTTGGGGAATGGGAGGGATTGGCAAAACAACCATAGCCAAATCCATTTACAATGAAATTCGTCATGAATTCAAATATAGAAGTTTTCTTGCAAATATTAGAGAAGTTTGGGGAGGAGATCGGGGCCCAATTGATTTGCAAGAACAGCTTCTTTCAGATATCCTTAAAACAACAAAGACGAACGTGCATAGCATTGATTGGGGAAAAGGCAAGATCAAGGAAATGCTTTGCACAAAAAAGGTACTTGTTGTTCTTGATGATGTGAGCACCTCTGATCAATTAAAGGCTTTATGTGGAAATCGTAATGAAATTAGTCGAGGAAGTGTAATAATCGTTACAACCAGAAACGCATGTCTACTCAGAGAGATTGGAGTTGACTGTGTGTATGGAATAGAGAAAATGAATAAAATTGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGGAGAGCAAATCCAACTAGAGACTTCTTTGAACTCTCAAAAGAAGTAATCACATACTGCGGAGGGCTACCACTAGCTCTTGAAGTTCTTGGATCTTACTTATACAAGAGAAGAAAAGAAGAGTGGCAAAGTGTATTATCAAAACTAAAAGAAATACCCCATAATAAAATACAAGAGAAACTGAAAATAAGCTATGATGGTTTAGCAGATCATATGGAGAAGGACATATTCCTTGACATATGCTGCTTCTTTATTGGTAAGGACAGAGGCTATGTCACAGAGATATTAAATGGTTGTGGACTTCATGCTGATATTGGAATACCAGTCCTAGTAGAAAGGAGCCTCATCAAAGTTGAGAAGAATAACAAACTCGGAATTCATGATTTACTACGAGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCGCTACCACAAAAGCGCAGTAGATTGTGGGTTCATGATCACGTACTTGATATATTGACTGAACATACCGGAACAGAAGCCATTGAGGGATTAGCTTTGAAATTGCATAGACCTAGCAGAGTTCACTTCAGTGCAGAAACATTTGAGAACATGAAAAGTCTGAGAATTTTGCAATTTGATCATGTCCAACTTGCTGGAGATTATGGGCATCTTTCCAAACACTTGACATGGGTCTATTGGCGAGGATTTTCATTAAAATACATACCTGACAACTTTTACCAGGGAAACGTAGTTGCTATTGACATGAAACACAGTAATCTTAAGCTAGTATGGAAAGAGCCCCAACAACAGTCGCTGGAAAGGCTAAAGTTCATCAATCTTAGTCATTCCAAGTTGTTATCAAAGACCCCTGACTTTTCAAAACTACCAAATCTTGAGAGAGTCATTCTCAAAGATTGTCCAAACTTGTATGAGGTGCACCATTCAATTGGAGATCTGCCTAATCTTCTTATTTTAAATTTGAAGGACTGTACATGCCTTCGGAATCTCCCAGTGATAAAATCGAAGTCTTTAAGAGTACTCATCCTTTCTGGTTGTTTAAAGATCGACAAGTTAGAAGAAGACATAGTGCAGATGGAATCATTAACAACTCTAAAGGCAGACAATACTAACCTAAAACAAGTGCCCTTTTCTATAATAAGATTCAAAAAGATTGGATTTATATCTCTCTGTGGATATGAAGGATTAGCAGGTGATTTATTTCCTTCTATCATATGGTCTTGGATGTCGCCAACAACAGGTCGTGTATCCTCTATGCAATCATTTGGAAGCACGTCAACATCTTTAGTCTCTGTGCATATACAGGATAATAATTTGGGTAACCTACTATCAAAGCTTACTGAATTTTCAAAACTTCGAAGCATCTGTGTGCAATGTAACTCAGATCTTCAATTAACTCAAGAATTAAGAAGAATAGTGGATGACTTCTACAAAGTATATTCTGCAATGGAAACCACATATGCACCACAAATTTCAGAAAATTCTGTGGTATCTCGTTTAATTGGAATTGGAAGTCACCACCAAGTCATGGATATGCTTAGTAATGATATGACAGAGGTCGGTTCTATCTCTCTAATCTCTCGCCTCTCTTTTTTTTTGTGTGTGTGA 2754 0.378 MKHAFSLLLTWSFFIEFSQPMPSYSSSSSFSKSRSKPKSKSQWTYDVFINFRGEDTRRNFVSHLYSALKDSGVNAFLDDEKLDKGGDLKSELLHAIEGSQITIVVFSQNYIHSTWCLDELHKIMECNAFRGQVVMPVFYDIGPSFLRDTQHISFEVISDQHSRIKQWKKALTQAANLAGWDLRNYRNENDVMKEIVCEVLKRLDRTYLSITNFPVGLECRLQHGIDFIRNKKIGTCILGIWGMGGIGKTTIAKSIYNEIRHEFKYRSFLANIREVWGGDRGPIDLQEQLLSDILKTTKTNVHSIDWGKGKIKEMLCTKKVLVVLDDVSTSDQLKALCGNRNEISRGSVIIVTTRNACLLREIGVDCVYGIEKMNKIESLELFSWHAFRRANPTRDFFELSKEVITYCGGLPLALEVLGSYLYKRRKEEWQSVLSKLKEIPHNKIQEKLKISYDGLADHMEKDIFLDICCFFIGKDRGYVTEILNGCGLHADIGIPVLVERSLIKVEKNNKLGIHDLLRDMGREIVRQSSPLPQKRSRLWVHDHVLDILTEHTGTEAIEGLALKLHRPSRVHFSAETFENMKSLRILQFDHVQLAGDYGHLSKHLTWVYWRGFSLKYIPDNFYQGNVVAIDMKHSNLKLVWKEPQQQSLERLKFINLSHSKLLSKTPDFSKLPNLERVILKDCPNLYEVHHSIGDLPNLLILNLKDCTCLRNLPVIKSKSLRVLILSGCLKIDKLEEDIVQMESLTTLKADNTNLKQVPFSIIRFKKIGFISLCGYEGLAGDLFPSIIWSWMSPTTGRVSSMQSFGSTSTSLVSVHIQDNNLGNLLSKLTEFSKLRSICVQCNSDLQLTQELRRIVDDFYKVYSAMETTYAPQISENSVVSRLIGIGSHHQVMDMLSNDMTEVGSISLISRLSFFLCV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00589 917 FunFam Disease resistance protein (TIR-NBS-LRR class) 374 456 - -
Viun10g00589 917 SUPERFAMILY "Winged helix" DNA-binding domain 442 548 IPR036390 -
Viun10g00589 917 SMART till_3 44 177 IPR000157 GO:0007165
Viun10g00589 917 Pfam NB-ARC domain 229 455 IPR002182 GO:0043531
Viun10g00589 917 Gene3D - 38 211 IPR035897 -
Viun10g00589 917 ProSiteProfiles TIR domain profile. 43 203 IPR000157 GO:0007165
Viun10g00589 917 SUPERFAMILY L domain-like 562 844 - -
Viun10g00589 917 Gene3D - 372 456 IPR042197 -
Viun10g00589 917 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 180 IPR035897 -
Viun10g00589 917 Pfam TIR domain 45 211 IPR000157 GO:0007165
Viun10g00589 917 Gene3D Ribonuclease Inhibitor 560 715 IPR032675 -
Viun10g00589 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 467 IPR027417 -
Viun10g00589 917 Gene3D Ribonuclease Inhibitor 716 856 IPR032675 -
Viun10g00589 917 Gene3D - 212 366 IPR027417 -
Viun10g00589 917 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 753 IPR044974 GO:0006952
Viun10g00589 917 FunFam Disease resistance protein (TIR-NBS-LRR class) 41 205 - -
Viun10g00589 917 PRINTS Disease resistance protein signature 646 662 - -
Viun10g00589 917 PRINTS Disease resistance protein signature 314 328 - -
Viun10g00589 917 PRINTS Disease resistance protein signature 237 252 - -
Viun10g00589 917 PRINTS Disease resistance protein signature 407 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00589 Viun-Chr10 5406460 5409830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00589 32 774 WRKY Transcription Factor Family AT4G12020 28.861 3.14e-74 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00589 - - vun:114167630 1799.25