Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00587 ATGACGTCACCAATTCCTTCCATTGAAGTCGCCTCTTCAACCACCAAACTCCCACGAAAGTACGATGTGCTCATCAACTTCAACGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGTTGGACTCACCACTTTCCTTCACCACGACAATGGAGTGAAACCAATGCACGAACCTATTCTCAATCTGTGTCGGGTAGCAATAGTTGTTTTCACCCAAACATATTCCCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATTATTCAATGGCACCAAACTTATTGCAAACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATATACGTCTTCAGAAGGGTGACTTTGGAAAAGCCTTCGAAACAACTGCACACCAAACATTTTCAGCACAAGAACTTGAACATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGTAATCACAGGAGTGATGCTGAACTAGTGGACAAAATCGTTAAGAGCGTTCTTAATTTACCAGTCATGTCTGCTACTAAATTTCCAGTTGGATTACAATCCAACGTGGAAGATCTGATTCGAACTATAAAAGATAAATCCAGCGAAGTTTGTATAGTAGGGATAACTGGAGCGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACAATCAAATTCATGATACATTCAGGGAGAAAAGTTTCATCGAGGATATTGGACAAGTTAGTCGACCGAGAGGGCATCGTGGTTTACAAGAACAATTTCTTTTCGATGTACTAAAAACAAAGGTGGAGATAACTAGCGTTGATATGGGTAGAAGAATGATTCGGGAAAGACTTACTGGGAGAAGGGTGTTCCTTGTACTTGACGATTTGACTGAGAATTTTACATTGTTTGACCTATGGGAATGCCGTGAATGGTTCAGTGGAGGAACTGTAATAATCATTACAACAAGAGATGTAGACCTACCCAGGATTCTTAAAGTTGATTCTGTTTTTGGGATAAAGCTAATGAGCGCAAAGGAATCCCTTGAGCTTCTTAGTTGGCATGCATTTAGAGAACCAAAACCAAAGGAAGAATACAATGACCTGGCTGAAAGTGTAGTTACTCATTGTGGAGGACTACCTCTAGCACTTGAAGTCGTTGGAAATTGTTTATTTGAAAGGACAAAAAAAGAATGGAAAAGTGTATTGTTAAAATTAGAGAAAATTCCCCTGCACAATGTTCAACAGAAATTGAAAATAAGCTTTGACGGATTACGCAATGAAATTGAAAAAGATTTATTCATTGATATATGTTGTTCCTTTGTTGGTGAGGGCAGAGCCTATGTTACGAAGATCCTAAATGACTGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTAATAGAATGTAGTCTTATAACAGTTAAAAAGAACAACAAACTTGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAAATTATACGTGAAATTGATGAAGAGGAATTTTGGAGGGAGTGGCCACCGGGGTTTGATGATGCAGAATATGTGTTGACTGATAATACAGGGAGAAGAGCCATTGAGCGATTGCCTGTGAAATTACGTTCAGTGAGAAGAGAACCATCAAGACTGCTGAAACACACTGAAAATTCTGATTCCCTTTCTAAGAAACTGAGGTGGATCAGTTTGGATTGGTTTTCTTCAGAATACCTACCTGACGAATTTTATCTGCATGAAGCAATAGCGATTGATTTAAAACACAGTGATCTTCGATTCGTCTTGAAAGAACCCCAGGATTTGAGGTGGCTGAAGGTCCTTAATCTTAGTCACTCCAAGTATTTAATAGAAACCCCTGACTTTTCTGGACTACCAAGTCTTGAACAGCTCATTCTCAAGGATTGTACAGGATTGCGTGAAGTTCACCAATCTATTGGATGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAGACTAAGAAATCTCCCTAGAGATATCTGTAAGATGAAATCTTTAAAAACTCTCATTCTCTCTGGGTGTCCCATGATTGACCTATTGGAAAAAGATGTAGTGCAAATGGAATCTCTTAGAACTCTAATTGCTGAAAATACAACTATGAAACATGTGCCTTTTTCTATTGTAAGCTCGAAAAGCATTGGACATATATCCTTATGTGGATTTGAGAGATTGTCACGTAATTTTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAGTAATGAATCCCATATCTTATATTCATTCGTTGTGTATGGATATGAACAATAATTGGGATGATATTGCACCTTTGCTCAGCAGTCTCACAAATCTTCGAAGTATTTTGGTGCAATGTGACTCCGAGTTTCAACTATCTGAACAAGTAAAATTTATTCTGGTCGAATATTTCGCAAATTTTACAGAATCAGGAATTTCAAAGCAGCAATTCAGGTCTCCTTTGATTGGTCTTGGAACATACCAGGAATTCTTCAATTCTGTCAGCGACAACATCTCTGAGGTATTGGCAAATAGTGAGTCTTGTGATGTCTCTCTTCCAAGTGATAATCTTCCTTATTGGTTGGCCTATATGGGTGAGGGAAATTCTGTTTCTTTCACTGTGCCTTGGGATCGTGACATGAAGGGAATGGCTTTGAGTGTTGTTTATTTATCAACCCCTGAAATTGTGGCAACTGAATGTCTTACAGGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCAAATACACAACTATGACACAATAACTTCCTTTAATGATATAGACTGGCAGTGTATAATGTCAAATTTGGGACCTAAAGACAAGGTGGAGATTTTTGTTACTTTTGGTGATGAATTGGTGGTAAAGAACACAATACTCTATCTTATATGTGGTGAATCAAATTACTTGAAAAAAGAGATAGAGTCAAAGAAAAATTGTCTCCTTAGATTCATAACGAAAATTGTAATGTGCGACTTCTGGTAA 3003 0.3863 MTSPIPSIEVASSTTKLPRKYDVLINFNGEDIRRKFVSHLDSVLSAVGLTTFLHHDNGVKPMHEPILNLCRVAIVVFTQTYSQSAWCLHQLQQIIQWHQTYCKHVLPVYYEIQPSDIRLQKGDFGKAFETTAHQTFSAQELEHGMSRWSHALTKAANFFGWDESNHRSDAELVDKIVKSVLNLPVMSATKFPVGLQSNVEDLIRTIKDKSSEVCIVGITGAGGSGKTTLAKAIYNQIHDTFREKSFIEDIGQVSRPRGHRGLQEQFLFDVLKTKVEITSVDMGRRMIRERLTGRRVFLVLDDLTENFTLFDLWECREWFSGGTVIIITTRDVDLPRILKVDSVFGIKLMSAKESLELLSWHAFREPKPKEEYNDLAESVVTHCGGLPLALEVVGNCLFERTKKEWKSVLLKLEKIPLHNVQQKLKISFDGLRNEIEKDLFIDICCSFVGEGRAYVTKILNDCGVDADSGIRVLIECSLITVKKNNKLGMHPLLQEMGREIIREIDEEEFWREWPPGFDDAEYVLTDNTGRRAIERLPVKLRSVRREPSRLLKHTENSDSLSKKLRWISLDWFSSEYLPDEFYLHEAIAIDLKHSDLRFVLKEPQDLRWLKVLNLSHSKYLIETPDFSGLPSLEQLILKDCTGLREVHQSIGCLCNLTLLNLKDCTRLRNLPRDICKMKSLKTLILSGCPMIDLLEKDVVQMESLRTLIAENTTMKHVPFSIVSSKSIGHISLCGFERLSRNFFPSIIRSWMSPVMNPISYIHSLCMDMNNNWDDIAPLLSSLTNLRSILVQCDSEFQLSEQVKFILVEYFANFTESGISKQQFRSPLIGLGTYQEFFNSVSDNISEVLANSESCDVSLPSDNLPYWLAYMGEGNSVSFTVPWDRDMKGMALSVVYLSTPEIVATECLTGVLIVNYTKCTLQIHNYDTITSFNDIDWQCIMSNLGPKDKVEIFVTFGDELVVKNTILYLICGESNYLKKEIESKKNCLLRFITKIVMCDFW 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00587 1000 Pfam NB-ARC domain 197 424 IPR002182 GO:0043531
Viun10g00587 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 716 IPR044974 GO:0006952
Viun10g00587 1000 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Viun10g00587 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 443 IPR027417 -
Viun10g00587 1000 Gene3D Ribonuclease Inhibitor 537 824 IPR032675 -
Viun10g00587 1000 Gene3D - 14 179 IPR035897 -
Viun10g00587 1000 PRINTS Disease resistance protein signature 383 397 - -
Viun10g00587 1000 PRINTS Disease resistance protein signature 215 230 - -
Viun10g00587 1000 PRINTS Disease resistance protein signature 290 304 - -
Viun10g00587 1000 PRINTS Disease resistance protein signature 604 620 - -
Viun10g00587 1000 Gene3D - 349 432 IPR042197 -
Viun10g00587 1000 Gene3D - 180 341 IPR027417 -
Viun10g00587 1000 SUPERFAMILY L domain-like 489 789 - -
Viun10g00587 1000 SMART till_3 20 158 IPR000157 GO:0007165
Viun10g00587 1000 Pfam TIR domain 20 186 IPR000157 GO:0007165
Viun10g00587 1000 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 161 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00587 Viun-Chr10 5399074 5403037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00587 19 748 WRKY Transcription Factor Family AT4G12020 25.316 2.53e-54 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00587 - - vun:114165880 1298.11