Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00582 ATGGAAATCGGGTCTTCATCGTCCAAACCTCCACGGAATTATGATGTGCTCATCAACTTCAACGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGCTTTCTCGTCCGTTGGACTCACAACTTTCCTTCACCATCAGAATGCAGTGGAGTCAATGCACGTCCAACAACCTATTCTAAATCTGTGTCGTGTAGTAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATTGCTTGGCACGAAAGTTATTGCCGACATGTTCTGCCCGTATATTACGAAATTCAACCCTCTGATGTGCGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGAAACTGCACAACAAACATTTTCAGCACAACAACTGGAGGATGGCATGTCCAGGTGGAGCCACGCACTCACAAAAGTAGCAAGTCTCTTTGGATGGGATGAGAGCAATCACAGGAGTGACGCTGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTATCAGTTTTGTCTGCTACCAAATTCCCAGTTGGATTACAAGACCAAGTGGAACATCTAATTCGAACTATAAGAAATAAGTCCTCGGATGTTTGCATTATTGGTTTTTGTGGAATGGGAGGATCAGGTAAAACCACCCTTGCCAAAGCCATCTACCATCAAATACATGGTACATTCATGCAGAAAAGTTTCATTGAAGATATTGCACAAGTTAGTGAACCAAGAGGGCATATTCATTTACAGCAACAACTTCTTTCAGATGTCCTAAAAATAAAGGTGGAGATACATAGCGTTGAGATGGGAAGAAGTATAATTCGAGACAGACTTTTCCGGAAAAGGGTGCTCATTGTACTTGACGATATGGATGACTATCTTCCATTATTAGATCTAAGGAAAAGTCGTTCATGGTTAAGTGAAGGAACTGTCATAATCATTACAACAAGAGACGAAGACCTACTGAGGAAACATCAAGTTGATTCTGTTTTTCGGATAAATGAAATGAATGATAACGAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAACCAAAACCAAGAAAAGAATACGATTACCTTGCAAGACGAGTGGTTTCTTGTTGTGGAGGACTGCCTCTAGCTCTTGAACTCATTGGAAGTAGTTTATTTGAAAGGAGGGAAAAGGAATGGCATAGTGTATTGGTTGGATTAGAGGGTATTCACATGTATGATGTTGAACAGAAATTGAAAATAAGCTTCGATTTATGCAATCAAATGGAAAGGGATTTATTCCTTGTTTTATGTCGTTACTTTGTTGGTAAGGACAGATCCTATGCTACGAAGATCCTAAATGCCTCTGGAATAAACGCTGATAGTGGAATAAGAGTTCTCATGGAGCGTAACCTCATTAAAGTTAAAGCGAATAACAAATTTGGAATACATTATTTGCTACAAGGAATGGGAATAGAAATTATTCGTGAAATTTTGAGAAAGGAACCTTGGAAGCACAATCGACTGTGGGTTGATGAAGATGGAAAATATGCATTGAAAGTGGATACGACATTACCTGTGAAATTGATTTCAACCAGTAGAGAACCATCAAGTCGGCCGAAAGTTGCTGTAAATTCTGGGTACCTTTCTGCGAAACTGAGATGGATCAATTTGCATGGATTTTCTTCAGAACACCTTCCTGAAGACTTTAACGTACATGGTGCAGTAGCAATTGATTTAAAACATAGTCTTCTTCGATTCGTCTGGAAAGAACCCCAGATTTTGAAGTGGCTAAAAGTCCTTAATCTTAGTCACTCAGAGTATTTGACAGAAACCCCTGACTTTTCCGGAATACCAAGTCTTCAACGGCTCATTCTCAAGGATTGTCCAAGATTGTGCAAAATTCACCCATCTATTGGATTTCTCTGTTATCTTACATTGTTAAATTTGAAGGACTGTGAATGTCTAAGCAATCTCCCCCGAGAGATATATAAGTTAAAATCTTTAAGAACTCTCATTCTCTCTGGATGTTCGAAGATTGACCTCGTGGAAAAAGATATAGTGCCCATGAAATCCTTGATAACTGTAATTGCAGAAACTAAAGCTTTGAAACAAGTTCCTTTTTTAATTTTAAGCTCAAAAGCCATTGGGTACATGTCCCAACGAGGATTTGAGAGATTGTCCTCTAATCTTTTTCCTTCTATCATTCGGTTTTGGATGTCAGCAACAATGAATCCCATATTTTATATTCATTCGATTGGCATGGATATCGATAATATTTGGGATGATATAGCGCCATTGCTCGGCAGCCTAGCAAATCTTCGAAGTGTTTTGGTGCAATGTAACACCGAGTTTCAACTATCAAAGCTAGTAAAAAATATTCTGGTCGAATATTTTGCAAATGTTACAGAATCAGGAATTTCAAAGCAGCACCTGAGGTTTTCTTTAATCGGTATTGGAGCATACTATGAATTCTTCAATGCTGTCAGCGATAACATATCTCAGGTATTGGCAGGTAGTGAATCTTGTGATGTCTCTGTTCTAGGTGACAACCATCCTTATTGGTTAGCCTATATGGGTGAAGGACATTCTGTTTCTTTCACTGTGCCTCCAGATACTGATTTGAAAGGAATGATTTTGTGTGTTGTTTATTTATCAACCCTTGAAATTGAGGCAACTGAATGTCTCAGAATTGTCTTAATTGTTAATTACACAAAGTGCAGATTCCACATACACATGCATGGCACAGGAATTTCCTTTAATGATATAGATTGGGAAGGTATAATGTCAAACTTTGGATATGGAGACAAGGTGGAGATTTTTGTGACATCTGGTCATGGATTGGTGGTAAAGAACACAATACTCTATCTTATATGGGGTGAATCAAATTACTACGAAAAAGAGCCTATGTCAAAGAAAAACTCTGTCCTTAGATTCATAAAGAAAATTGTAGAGTGA 2958 0.3834 MEIGSSSSKPPRNYDVLINFNGEDIRRKFVSHLDSAFSSVGLTTFLHHQNAVESMHVQQPILNLCRVVIVVFTKTYSQSAWCLHQLQQIIAWHESYCRHVLPVYYEIQPSDVRLQKGDFGKAFKETAQQTFSAQQLEDGMSRWSHALTKVASLFGWDESNHRSDAELVDKIVKSVLNLSVLSATKFPVGLQDQVEHLIRTIRNKSSDVCIIGFCGMGGSGKTTLAKAIYHQIHGTFMQKSFIEDIAQVSEPRGHIHLQQQLLSDVLKIKVEIHSVEMGRSIIRDRLFRKRVLIVLDDMDDYLPLLDLRKSRSWLSEGTVIIITTRDEDLLRKHQVDSVFRINEMNDNESLELFSWHAFREPKPRKEYDYLARRVVSCCGGLPLALELIGSSLFERREKEWHSVLVGLEGIHMYDVEQKLKISFDLCNQMERDLFLVLCRYFVGKDRSYATKILNASGINADSGIRVLMERNLIKVKANNKFGIHYLLQGMGIEIIREILRKEPWKHNRLWVDEDGKYALKVDTTLPVKLISTSREPSSRPKVAVNSGYLSAKLRWINLHGFSSEHLPEDFNVHGAVAIDLKHSLLRFVWKEPQILKWLKVLNLSHSEYLTETPDFSGIPSLQRLILKDCPRLCKIHPSIGFLCYLTLLNLKDCECLSNLPREIYKLKSLRTLILSGCSKIDLVEKDIVPMKSLITVIAETKALKQVPFLILSSKAIGYMSQRGFERLSSNLFPSIIRFWMSATMNPIFYIHSIGMDIDNIWDDIAPLLGSLANLRSVLVQCNTEFQLSKLVKNILVEYFANVTESGISKQHLRFSLIGIGAYYEFFNAVSDNISQVLAGSESCDVSVLGDNHPYWLAYMGEGHSVSFTVPPDTDLKGMILCVVYLSTLEIEATECLRIVLIVNYTKCRFHIHMHGTGISFNDIDWEGIMSNFGYGDKVEIFVTSGHGLVVKNTILYLIWGESNYYEKEPMSKKNSVLRFIKKIVE 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00582 985 PRINTS Disease resistance protein signature 378 392 - -
Viun10g00582 985 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00582 985 PRINTS Disease resistance protein signature 664 680 - -
Viun10g00582 985 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00582 985 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00582 985 Pfam TIR domain 13 176 IPR000157 GO:0007165
Viun10g00582 985 Pfam NB-ARC domain 191 409 IPR002182 GO:0043531
Viun10g00582 985 Gene3D - 6 175 IPR035897 -
Viun10g00582 985 Gene3D - 176 339 IPR027417 -
Viun10g00582 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
Viun10g00582 985 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00582 985 SUPERFAMILY "Winged helix" DNA-binding domain 415 514 IPR036390 -
Viun10g00582 985 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 704 IPR044974 GO:0006952
Viun10g00582 985 Gene3D Ribonuclease Inhibitor 544 706 IPR032675 -
Viun10g00582 985 SMART AAA_5 207 348 IPR003593 GO:0016887
Viun10g00582 985 SUPERFAMILY L domain-like 547 782 - -
Viun10g00582 985 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00582 985 Gene3D - 343 426 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00582 Viun-Chr10 5350896 5354728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00582 595 710 WRKY Transcription Factor Family AT4G12020 35.345 4.97e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00582 - - vun:114165880 1452.96