Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00580 ATGGAATTCGCGTCTTCATCGTCCAAACTACCACGGAATTATGATGTGCTCATCAGCTTCAATGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCCTCCGTTGGACTCACCACTTTCCTTCACTATCAGAATGCAGTGGAGTCGATGCACGTCCAACAACCTATTCTAAATCTGTGTCGTGTAGTAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATTGCTTGGCACGAAAGTTATTGCCGACATGTTCTGCCCGTATATTACGAAATTCAACCCTCTGATGTGCGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGAAACTGCACAACAAACATTTTCAGCACAACAACTGGAGGATGGCATGTCCAGGTGGAGCCACGCACTCACAAAAGTAGCAAGTCTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGAACTAGTGGGCAAAATTGTTAAGAGCGTTCTTAATTTATCAGCTTTGACTGCTACCAAATTCCCAGTTGGATTACAAGACCAAGTGGAAGATCTAATTCGAACTATAAGAAATAAGTCCACGGATGTTTGTACAATAGGGATATGTGGAATGGGAGGATCAGGTAAAACCACCCTTGCCAAAGCCATCTACTATCAAATACATGGTACATTCATGGAGAAAAGTTTCATTGAAGATATTGCACAAGTTAGCGAACCGAGAGAGCGTATTCATTTACAGCAACAACTTCTTTCGGATGTCCTAAAAACAAAGGTGGAGATACATAGCGTTGAGATGGGAAGAAGTATGATTCGAGACAGACTTTTTCGGAAAAGGGTGCTCATTGTACTTGACGATATAGATGACTATTTTCCATTATTAGATCTAAGGAAAAGTCGTTCATGGTTAAGTGAAGGAACTGTCATAATCATGACAGCAAGAGACGAAGACCTACTGAGGAAACATCAAGTTGATTCTGTTTTTCGGATAAATCTAATGAATGAAAAGGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCGAAAAAAGAATACGATTACCTTGCAAGAAGAGTAATTTCTTGTTGTGGAGGACTACCTCTAGCTCTTGAACTCATTGGAAGTAGTTTATTTGAAAGGAGGGAAAAGGAATGGCATAGTGTATTGGTTGGATTAGAGGGTATTCACATGGATGATGTTGAACAGAAATTGAAAATAAGCTTCGATTTATGCAATCAAATGGAAAAGGCTTTATTCCTTATTGTTTGTCGTTATTATATTGGTAAGGACAGATCCTATGCTATGAAGATCCTAAATGGCCCTGTAGTAAACGCTGATAGTGGAATAAGAGTTCTCATGGAGCGTAACCTCATTAAAGTTAAAGCGAACAACAAATTTGGAATACATCGTTTGCTACAACAAATGGGAGTAGAAATTTTTCGTGAAAATTTAAAAGAGGAACCGTGGAAGCACGGGCGACTGTGGTTTGATAAAGGTGGAGAATATGCATTGGAAGTGGATACGGTAAGAGCATTCTTTATATGTGGTTTGAAACTTCCTTTGAAAGTATTTGCTTTCTCATGTAGTCAATACATTCGCTTTTCTTTGCTCTTAAATTCACAGGGGAGAAATGCCTCTCAGACATTTCCTCCGATATTGATTCCAAGTAGAGAACCATCAGGTTTCCCAGAAGTTGTTACAGTTTCTAAGTACATTTATACGAAACTGATATGGATCAATTTGCAAGGGTTTTCTTCAGAACACCTACCTAAAGACTTTAATATGCATGGTGCAGTAGCAATTGATTTAAAACACAGTCTTCTTCGATTCTTCTGGAAAGAACCCCAGGTTTTGAGATCGCTAAAAGTACTTAACCTTAGTCACTCCATGTACTTGACAGAAACACCTGACTTTTCTAGACTACCAAGTCTTGAACAACTCATTCTAAAAGATTGTCCGAGATTACGCAAAGTACACAGATCTATTGGACATCTCTGTTATCTTATACTGCTTAATTTGAAGGACTGTAAATGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTGAAATCTTTAAGAACTCTTATCCTCTCTGGGTGTTCCAAGGTTGGCCGAATGGGAAAAGATATAGTGCGAATGAAATCCTTGATAACTCTAATTGCTGAAAATACAGCAGTCAAACAAGTGCCCTTTTCAATTGTAACTTCAAAAGCCATTGGATATATGTCAATACCAGGATTTAAGAGATTGTCATGTAATCTTTTTCCTTCAATCATTATTCGGTCTTGGATGTCGCCAACAATGAATCCTGTATCCTATATTCATTCATTGTGCATGGATATCAATAATAGCTGGGATGATATTGTGCCATTGCTTGGTAGCGTGGCAAACCTTCGAAGTGTTTTGGTACAATGTGAAACCGAGTTTCAACTATCTAAGCAAGTACAATACATTCTGGCCGAATATTTTTCAAATATTACAGAATCAGGAATTTCAAAGCAGCACTTCAGGTCTTCTTTCATTGGTGTTGGAGCATACTATGAATTCTTCAATGCTGTCAGCGGTAACATATCTGAGGTATTATTGGCAAGTAGTGAATCCTCTGATATCTCTCTTCTAGGTGACACCCATCCTTATTGGTTTGCCTATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCCAGATATTGATGTGAAAGGAATGATTTTGTGTGTTGTTTATTTATCAACGCTTGAAATTGAGGCAACTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAATTGCACATTACAGATATACAAACATAGCCCAGTAATTTCCTTTAATGATATAGATTGGCATGATATAATGTCAAATTTGGGACCTGGAGATAAGGTGGAGATTTTTGTTACTTTTGGTCACAGATTGGTGGTGAAGAACACAATACTCTATCTTATATGTGGTGAATCAAATTACTTGAGAAAAGAGCCAGAGTCAAAGATGAATTTTCTCCTTAGATTTATAATGAAAATTGTAATGTGTGACTTCTAG 3087 0.3813 MEFASSSSKLPRNYDVLISFNGEDIRRKFVSHLDSALSSVGLTTFLHYQNAVESMHVQQPILNLCRVVIVVFTKTYSQSAWCLHQLQQIIAWHESYCRHVLPVYYEIQPSDVRLQKGDFGKAFKETAQQTFSAQQLEDGMSRWSHALTKVASLFGWDESNHRSDAELVGKIVKSVLNLSALTATKFPVGLQDQVEDLIRTIRNKSTDVCTIGICGMGGSGKTTLAKAIYYQIHGTFMEKSFIEDIAQVSEPRERIHLQQQLLSDVLKTKVEIHSVEMGRSMIRDRLFRKRVLIVLDDIDDYFPLLDLRKSRSWLSEGTVIIMTARDEDLLRKHQVDSVFRINLMNEKESLELLSWHAFREPKPKKEYDYLARRVISCCGGLPLALELIGSSLFERREKEWHSVLVGLEGIHMDDVEQKLKISFDLCNQMEKALFLIVCRYYIGKDRSYAMKILNGPVVNADSGIRVLMERNLIKVKANNKFGIHRLLQQMGVEIFRENLKEEPWKHGRLWFDKGGEYALEVDTVRAFFICGLKLPLKVFAFSCSQYIRFSLLLNSQGRNASQTFPPILIPSREPSGFPEVVTVSKYIYTKLIWINLQGFSSEHLPKDFNMHGAVAIDLKHSLLRFFWKEPQVLRSLKVLNLSHSMYLTETPDFSRLPSLEQLILKDCPRLRKVHRSIGHLCYLILLNLKDCKCLSNLPREIYKLKSLRTLILSGCSKVGRMGKDIVRMKSLITLIAENTAVKQVPFSIVTSKAIGYMSIPGFKRLSCNLFPSIIIRSWMSPTMNPVSYIHSLCMDINNSWDDIVPLLGSVANLRSVLVQCETEFQLSKQVQYILAEYFSNITESGISKQHFRSSFIGVGAYYEFFNAVSGNISEVLLASSESSDISLLGDTHPYWFAYMGEGDSVSFTVPPDIDVKGMILCVVYLSTLEIEATECLRSVLIVNYTNCTLQIYKHSPVISFNDIDWHDIMSNLGPGDKVEIFVTFGHRLVVKNTILYLICGESNYLRKEPESKMNFLLRFIMKIVMCDF 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00580 1028 Pfam NB-ARC domain 191 417 IPR002182 GO:0043531
Viun10g00580 1028 Gene3D - 9 179 IPR035897 -
Viun10g00580 1028 Gene3D - 343 426 IPR042197 -
Viun10g00580 1028 Pfam TIR domain 13 177 IPR000157 GO:0007165
Viun10g00580 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 435 IPR027417 -
Viun10g00580 1028 Gene3D - 180 339 IPR027417 -
Viun10g00580 1028 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00580 1028 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00580 1028 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00580 1028 SUPERFAMILY L domain-like 580 817 - -
Viun10g00580 1028 PRINTS Disease resistance protein signature 378 392 - -
Viun10g00580 1028 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00580 1028 PRINTS Disease resistance protein signature 702 718 - -
Viun10g00580 1028 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00580 1028 Gene3D Ribonuclease Inhibitor 584 731 IPR032675 -
Viun10g00580 1028 SMART AAA_5 207 349 IPR003593 GO:0016887
Viun10g00580 1028 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 724 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00580 Viun-Chr10 5342892 5346852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00580 12 748 WRKY Transcription Factor Family AT4G12020 26.184 4.79e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00580 - - vun:114165880 1518.06