Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00579 ATGAACCAAAAGGAGTCTCTTGAGCTTCTCAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATATCATTACCTTGCAAGAAGCGTGCTTTCTTATTGTAGAGGACTACCTTTAGCTCTTGAAGTCGTTGGAAGTTGTTTATTTGAAAGGACCGAAGAAGAATGGGATATTGTATTGTCAAGATTACGAAAAATGACATATCATATATGGAAAATAAGCTTTTACTGTTTAGGCAATCAAATGGAAAGGGATTTATTCCTTGATGTATGTTGTTGCTTTGTTGGTGAAGACATAGCCTATGCTACGAGGATTCTAAATGGCTGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGATCGTAACCTCATAAAACTTAAAAAGAACAATAAACTTGGAATGCATCCTTTGCTACAAGAAATGGGAAGACATATTATTCGTGAAATTCGTCAAGAGGAAATGTGGAAGGAGCGGCGACTGCGGTTTGATGGTGCAGAATATGTATTGACAGATAATACAAAGACAGGAACCATTGAGCGATTGCCTTTGAAACTGCGTTCAGGTAGAAGAGAACTATCAAGACTGCTGAAAGCCGCTGTAAATTCTGATTACCTTTCTCCGAAACTAAGATGGATCCGTTTGCAAGGGTTTTCTTCACAACACCTATCTAATAGCTTTAATGTGGATCATGCAATAGCGATTGATTTAAAACACAGTCTTCTCCGATTCGTCTGGACAGAACCACAGGTTTTGAGGGGGTTAAAAGTCCTTATTCTTAGTCACTCCAAGAATTTAACACAAACCCCTGACTTTTCTGGGCTACCAAGTCTTGAAAAGCTCATTCTCAAGGATTGTTCAGGATTGCGCAAAGTTCATCAATCTATTGGATGTCTCAGCCATCTAACACTGCTAAATTTGAAGGACTGTACAAGTCTAAGAAATCTCCCTAGAGATATATGTAAGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGGTGTCCCATGATTGACCTATCGGAAAAAGATGTAGTGGAAATGGAATCTCTTATAACTCTAATTGCTGAAAATACAACTATGAAACATGTGCCTTTTTCGATTCTAAACTCGAAAAGCATTGGACATATCTCCCTACGTGGATTTGAAGGATTGCCCCGAAATCTTTTTCCTTCTATCATTCGGTCTTGGCTATCGCCAGAAATGAATTCCATATCTTATATTCATTCGTCGTTCATGGATATTGATAATTGTTGGGATGATATTGCGTCATTGCTTAGCAGCCTGAAAAATCTTCGAAGTATTTTGGTGCAATGTGATACCGACTTCCAACTATCTAACCAAGTAAAAAGTATTGTGGTCGAATATTTCGCAAATTTTACCGAATCAGGAATTTCAAAGCAGCAATTCAGGTCTCCTTTGATTGGTCTTGGAACATACCATGAATTCTTCAATGCTGTTACCGATAACATCTCCGAGGCATTGGTAAACAGTGAGTGTAGTAATGTCTCTCTTCCAGGTGATAACCTTCCTTATTGGTTGGCCTATATGGGTGAGGGATACTCTGTTTCTTTCACTGTGCCTAGAGATCGTGACATCAAAGGATTGGCTTTATGTGTTGTTTATTTGTCAACCCCTGAAATCGTGGCAATTGATTATCTTAGAAGTGTCTTAATTGTTAATCACACAAAGTGCACATTGCAGATACACAACCATGGCACAGTAATTTCCTTTAATGATACAGACTGGCATGGTATAATGTCAAATTTGGGAGCTGGAGACAAGGTGGAGATTTTTGTTGCTTTTGGTCACGGATTGGTGGTCAAGAACACAATACTCTATCTTATATGTGATGAGTCAGATTACTTGAGAAAAGAGCTAGAGTCAAAGATGAATTCTCTTCTTAGATTTATAATGAAAATTGTAATGTGTGACTTCTCATAA 1947 0.3806 MNQKESLELLSWHAFREAKPKEEYHYLARSVLSYCRGLPLALEVVGSCLFERTEEEWDIVLSRLRKMTYHIWKISFYCLGNQMERDLFLDVCCCFVGEDIAYATRILNGCGVDADSGIRVLIDRNLIKLKKNNKLGMHPLLQEMGRHIIREIRQEEMWKERRLRFDGAEYVLTDNTKTGTIERLPLKLRSGRRELSRLLKAAVNSDYLSPKLRWIRLQGFSSQHLSNSFNVDHAIAIDLKHSLLRFVWTEPQVLRGLKVLILSHSKNLTQTPDFSGLPSLEKLILKDCSGLRKVHQSIGCLSHLTLLNLKDCTSLRNLPRDICKLKSLKTLILSGCPMIDLSEKDVVEMESLITLIAENTTMKHVPFSILNSKSIGHISLRGFEGLPRNLFPSIIRSWLSPEMNSISYIHSSFMDIDNCWDDIASLLSSLKNLRSILVQCDTDFQLSNQVKSIVVEYFANFTESGISKQQFRSPLIGLGTYHEFFNAVTDNISEALVNSECSNVSLPGDNLPYWLAYMGEGYSVSFTVPRDRDIKGLALCVVYLSTPEIVAIDYLRSVLIVNHTKCTLQIHNHGTVISFNDTDWHGIMSNLGAGDKVEIFVAFGHGLVVKNTILYLICDESDYLRKELESKMNSLLRFIMKIVMCDFS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00579 648 Gene3D Ribonuclease Inhibitor 126 472 IPR032675 -
Viun10g00579 648 SUPERFAMILY "Winged helix" DNA-binding domain 69 161 IPR036390 -
Viun10g00579 648 SUPERFAMILY L domain-like 208 438 - -
Viun10g00579 648 PRINTS Disease resistance protein signature 323 339 - -
Viun10g00579 648 PRINTS Disease resistance protein signature 35 49 - -
Viun10g00579 648 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 366 IPR044974 GO:0006952
Viun10g00579 648 Pfam NB-ARC domain 2 75 IPR002182 GO:0043531
Viun10g00579 648 Gene3D - 1 79 IPR042197 -
Viun10g00579 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00579 Viun-Chr10 5321249 5323927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00579 268 410 WRKY Transcription Factor Family AT5G45050 27.097 3.33e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00579 - - vun:114167129 1284.63