Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00576 ATGGAATTTGCATCTTCATCATCAAAACTCTCACGGAAGTACGATGTGCTCATCAACTTCAATGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGCTTTCTCTGCTGTTGGACTTACTACTTTCCTCCCCCACGACAATGCAATGAAGTCAACGCACATACAACAACCTATTGTCGATCTCTGTCGTATAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCCCGGTGTCTTCATCAGCTTCAACAAATCATCGAATGGCACGAAACTTATTGCCGACATGTTCTGCCTGTATATTACGAAACTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAGAGGCCTTCAAAGCAACTGCACACCAAACATTCTCGGGACAAGAACTGGAGCATGGTATGTCCAGGTGGAGCTACGCACTCACCAAAGCTGCAAATTTCTTTGGATTGGATGACAGCAATTACAGGAGTGATGCTGAACTCGTGGAAAAAATTGTTAAGAGCGTTCTTAATTTACCAATCTTGTCTGCTGCTAAATTTCCAGTTGGATTACAGTCCCGCGTGGAAGATGTGATTCAAATCATGGAAAAGAAATCCTGGAGAGTTTTTACGATAGTGATATTTGGGAGGGGAGGATCGGGTAAAACCACCCTCGCCAAGGCCATCTACAATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGCACAAGTTCGTCGAAACAGAGCGTATGCTCATTTACAAAAACTTCTTTCAGATGTCCTGAAAACAAAGGTGGAAATGCATAGCTTTGAGATGGGAGCAAATATGATTCGGGAAAGACTTTCTGGAAAAAGGATGCTTATTGTACTTGACGATTTAAATGAGTATACTCCATTTTTAGAACTATGTGCATGTTTCGGTGGAGGAACTGTAGTAATCATTACAACAAGAAATGAAAGCATACGGAACATATATCCAGTTGGTTCTGTATTTCGGATAAAGCTATTGAATGCAAATGAGTCACTTGAACTTCTTAGTTGGAACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAACGACCTTGCAAAAAGTGTAGCTTTTCATTGTGGAGGACTACCTCTAGCTCTTGAGATCATTGGAAATTGTTTATTTCAAAGTACAAAAGAAGAATGGAATAGTATATTGTGTAAATTAGCGAGAATTCCCCAGCACCATGTTGAACCGAAATTGAAAATAAGCTTTGAGGGATTACGTAATCAAATGGAAAAAGATTTGTTCCTTGATGTGTGTTGTTCCTTTGTTGGTGAAGGCAGAACCTTTGTTAAGAAGATCCTAAATGGCTGTGGAATATACGATGATGATAGCGGAATAAGAGTTCTCATAGAACGTGGTCTCGTAAAAGTTAAAAAGAACAACAAACTTGGAATGCATCATTTGCTACAAAAAATGGGAAGACAAATAATTCATGAAATTGATAAAGATGAAATGTGGAAGGAGCGGCAAATGCGGTTTGATGGTGCAGGATATGTGTTGACAAATAATAGAGGGACGAGAGTAACTGATCGATTGCCTGTTAAATTGCGTTCAACCAGAAGAGAACCATCAAGACTGCAGAAACTTGATGGAAATTCTGAGTACCATTCTAAGAAACTGAGATGGATCAGTTTGCAAGGGTTTCATGAAAATTACCAAATATTTAACGAGTTTAGTCTGCATGATGCAATAGCTATTGATTTAGATCACAATCTTCTTCAATTCGACTGGAAACAACCACAGGTTTTGAGGTGGCTAAAAGTCCTTAATCTTAGTCACTCTAAGTATTTAACAGAAACCCCTGATTTTTCCGGATTACAAAGTCTTGAACAGCTTTTTCTCAAGAATTGTCAAAGATTACGCAAAGTACACCGATCTATTGGATGTCTCTGCTATCTTATTCTGCTAAATTTGAAGAATTGTACAAGCCTAAGCAATCTCCCTCGAGAGATATATACGTTGAACTCTTTAAGAACTCTTATCCTCTCTGGGTGTTCCAAGATTGACCTCATGGAAAAAGATATTGTACGAATGAAATCCTTGATAACTCTAATTGCTGAAAATACAGTTGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAGCCATTGGATATATATCCCTACGAGGATTTGAGAGATTTTCATGTAATCTTTTTCCTTCAATCATTATTCGGTCTTGA 2232 0.3831 MEFASSSSKLSRKYDVLINFNGEDIRRKFVSHLDSAFSAVGLTTFLPHDNAMKSTHIQQPIVDLCRIAIVVFTKTYSQSARCLHQLQQIIEWHETYCRHVLPVYYETQPSDVRLQKGDFGEAFKATAHQTFSGQELEHGMSRWSYALTKAANFFGLDDSNYRSDAELVEKIVKSVLNLPILSAAKFPVGLQSRVEDVIQIMEKKSWRVFTIVIFGRGGSGKTTLAKAIYNQIHGTFTEKSFIEDIAQVRRNRAYAHLQKLLSDVLKTKVEMHSFEMGANMIRERLSGKRMLIVLDDLNEYTPFLELCACFGGGTVVIITTRNESIRNIYPVGSVFRIKLLNANESLELLSWNAFREAKPKEEYNDLAKSVAFHCGGLPLALEIIGNCLFQSTKEEWNSILCKLARIPQHHVEPKLKISFEGLRNQMEKDLFLDVCCSFVGEGRTFVKKILNGCGIYDDDSGIRVLIERGLVKVKKNNKLGMHHLLQKMGRQIIHEIDKDEMWKERQMRFDGAGYVLTNNRGTRVTDRLPVKLRSTRREPSRLQKLDGNSEYHSKKLRWISLQGFHENYQIFNEFSLHDAIAIDLDHNLLQFDWKQPQVLRWLKVLNLSHSKYLTETPDFSGLQSLEQLFLKNCQRLRKVHRSIGCLCYLILLNLKNCTSLSNLPREIYTLNSLRTLILSGCSKIDLMEKDIVRMKSLITLIAENTVVKQVPFSIVSSKAIGYISLRGFERFSCNLFPSIIIRS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00576 743 Gene3D - 178 329 IPR027417 -
Viun10g00576 743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 690 IPR044974 GO:0006952
Viun10g00576 743 SUPERFAMILY "Winged helix" DNA-binding domain 413 506 IPR036390 -
Viun10g00576 743 SUPERFAMILY L domain-like 547 728 - -
Viun10g00576 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 433 IPR027417 -
Viun10g00576 743 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00576 743 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00576 743 PRINTS Disease resistance protein signature 374 388 - -
Viun10g00576 743 PRINTS Disease resistance protein signature 668 684 - -
Viun10g00576 743 PRINTS Disease resistance protein signature 284 298 - -
Viun10g00576 743 Pfam NB-ARC domain 193 409 IPR002182 GO:0043531
Viun10g00576 743 Gene3D - 10 177 IPR035897 -
Viun10g00576 743 Gene3D - 339 423 IPR042197 -
Viun10g00576 743 Gene3D Ribonuclease Inhibitor 511 737 IPR032675 -
Viun10g00576 743 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00576 743 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Viun10g00576 743 Pfam TIR domain 13 175 IPR000157 GO:0007165
Viun10g00576 743 SMART AAA_5 207 343 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00576 Viun-Chr10 5300866 5304881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00576 11 714 WRKY Transcription Factor Family AT4G12020 26.267 6.01e-53 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00576 - - vun:114165880 961.059