Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00575 ATGGAAGGATCTGGTAAAACCACCATTGCCAAAGCCATCTACAACCATATTCATGGCACATTCAAGGAAAAAAGTTTCATTGAAGATATTGCGCGAGTTAGTCGAACCAAAGGGTATGCTCATTTACAAGGACAACTTCTGTCGGATATCCTTAAATCAAAGGTGGAGATACATAGCGTTGAGATGGGAAGACGTATGCTTCAGCAAAGGCTTCTTGGTAAAAGGGTGTTGATTGTACTTGACAATATAGATGAGAAAGCTCCATTATTAGATCTTTGGAGAAATCATGCATGGTTCAATAAAGGAACTGTAATAATAATTACAACAGCACATGAACACCTACTAAGGACGAGGATAGCTCAAGATGATTCTATTTTTCGGATAAACGTAATGAACGAAAATGAGTCGCTTGAGCTTCTTAGCTGGCACGCATTTAGAGAAGCAAAACCAAAAGCAGAATACGACGACCTTGCAAAGGAAGTAGTTGCTTATTGTGGAGGACTACCTCTGGCTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAGGTGGAAAGTGTCACTATTAGAGAAAATTCCCATGTATGATGTTCAAAAGAAATTGAAAACAAGCTTTGGAGGTTTACATAATCTAATGGAAATTGATTTATTTCTTGACGTATGTTGTTCCTTTGTTGGTAAGGACAGAGCCTATGTTACGAAGATTCTAAAGAGCTGTGGAGTAGATGCTGATAATGGAATAAGATTTCTCATAGATCGTAACCTCATCAAAGCTAAAAGGAACAACAAACTTACAATGCATCCTTTGTTACAAGACATGGGAAGAGAAATTGTTCATAAATTTATACAAGAGGAAGTTTGGATGAAGAGTCCACGGTTTGATCATTCATATGTATTGACAAATAATACAGGGAAGAAATCCTCTAGGGAATTGCCTGTGAAACTTCTGTCATCCATAAGAGAACCATCAGGACTGCTGAAACTCGCTCAAAATTCTGAGTGTCGCTCTAAGAAATTGAGATGGATGAGTTTGCAAGGGTTTTCTTCAAAAAATCTATCTATCGACTTTGATCTGAATGATGCAATAGCAATTGATTTAAAACGCAGTCTTCTTCGACTCGTCTGGAAACAACCCCAGTTTTTAATGTGGCTAAAAGTTCTTAATCTTAGTCACTCCAAGAATTTAACACAAACCCCTGACTTTATCGGACTACCACGTCTTGAACGTCTCATTCTCAAAGATTGTCCACGATTGCACGAACTGCACCATTCTATTGGATTTCTCAGAAATCTTATACTGCTAAATCTGAAGGACTGTACAGGTCTAAGATATCTCCCTAAGGAGATAAGGAAGTTGAAATCTTTAAAATCTCTCATTCTTTCTGGTTGTTTGAAGATTCTCCTATTGGAAAAAGATATGATGCAAATGAAATCCCTGATAACTCTAGTTGCTGAGAATAAACCTATGAAACAAGTGCCTTTTTCAATTGTAAACTCAGAAAGCATTGGATATATATCCCTACGTCGATTTGAGGGATTGTTACGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAACAATGAATCCCATATCTTATATTCATTCAATGTGCATGGATATCGATAATAGTTGGGATGATATTGAACCATTGCATGGCAGCCTCAAAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTCCAACTATCTAAACAAGTACAAAATATTCTGGTAGAATATTTTGCATCTATTATAGAACCAGAAATTTCAAAGCAACAACTCAGGTGTTCTTTGATTGGTGTCGGAGCATACGATGAATTCTTCAATGTTTTCAGCGATAACATACCTAAGGATTTGGCATACAGTGAGTGGTGTGATGTTTCTCTCCCAGTTGTCAATGAAACTTATTGGTTGGCCCATATGGGTGAGGGACATTCTGTTTCCTTCACAGTGCCCGAGAATCGTGTCATGAAGGGAATGGCTTTGTGTGTGTTTTATTTATCAACCTCTGAAATCGTGGCAGCTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCATATACACAACAATGACACAATCATATCCTTTAATGATATAGATTGGCAGGGTATAAAGTCTAATTTAGGATCTGGAGACAAGGTGGAGATTTTTCTGACTTTTGCTCATGGATTGCTTGTGAAGAACACAATTTTCTATTCTATATGCGCGGAATAA 2259 0.3745 MEGSGKTTIAKAIYNHIHGTFKEKSFIEDIARVSRTKGYAHLQGQLLSDILKSKVEIHSVEMGRRMLQQRLLGKRVLIVLDNIDEKAPLLDLWRNHAWFNKGTVIIITTAHEHLLRTRIAQDDSIFRINVMNENESLELLSWHAFREAKPKAEYDDLAKEVVAYCGGLPLALEVIGSSLFERTKEEWRWKVSLLEKIPMYDVQKKLKTSFGGLHNLMEIDLFLDVCCSFVGKDRAYVTKILKSCGVDADNGIRFLIDRNLIKAKRNNKLTMHPLLQDMGREIVHKFIQEEVWMKSPRFDHSYVLTNNTGKKSSRELPVKLLSSIREPSGLLKLAQNSECRSKKLRWMSLQGFSSKNLSIDFDLNDAIAIDLKRSLLRLVWKQPQFLMWLKVLNLSHSKNLTQTPDFIGLPRLERLILKDCPRLHELHHSIGFLRNLILLNLKDCTGLRYLPKEIRKLKSLKSLILSGCLKILLLEKDMMQMKSLITLVAENKPMKQVPFSIVNSESIGYISLRRFEGLLRNLFPSIIRSWMSPTMNPISYIHSMCMDIDNSWDDIEPLHGSLKNLRSVLVQCDTEFQLSKQVQNILVEYFASIIEPEISKQQLRCSLIGVGAYDEFFNVFSDNIPKDLAYSEWCDVSLPVVNETYWLAHMGEGHSVSFTVPENRVMKGMALCVFYLSTSEIVAAECLRSVLIVNYTKCTLHIHNNDTIISFNDIDWQGIKSNLGSGDKVEIFLTFAHGLLVKNTIFYSICAE 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00575 752 PRINTS Disease resistance protein signature 455 471 - -
Viun10g00575 752 PRINTS Disease resistance protein signature 165 179 - -
Viun10g00575 752 PRINTS Disease resistance protein signature 70 84 - -
Viun10g00575 752 Pfam NB-ARC domain 1 209 IPR002182 GO:0043531
Viun10g00575 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 216 IPR027417 -
Viun10g00575 752 Gene3D Ribonuclease Inhibitor 324 600 IPR032675 -
Viun10g00575 752 Gene3D - 130 214 IPR042197 -
Viun10g00575 752 Gene3D - 1 125 IPR027417 -
Viun10g00575 752 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 486 IPR044974 GO:0006952
Viun10g00575 752 SUPERFAMILY L domain-like 339 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00575 Viun-Chr10 5292270 5295599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00575 1 285 WRKY Transcription Factor Family AT5G45050 30.796 1.47e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00575 - - vun:114165880 920.613