Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00574 ATGGAATCAGCGTCTTCATCTTTCCAACACCAACGGATGTACGATGTGCTCATCAACTTTGCTGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGACTCTGTCCTCACTTCTGTTGGAATCTCCACTTTCCTTCACCACCAGAATGCAGTGAAGGAAATGTATACCGAAGAACCTATCCTGAATATGTGTCAGGTAGTAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCCTGGTGTCTTCATCAACTTCAACAAATCATTCAGTGGCACGAAACCTATCGTCGACATGTTCTGCCTGTATACTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAAGGTGATTTTGGAAAAGCCTTCACAGAAACTGCTCACCAAACGTTCTCAGGAAAACAACTGGAGCATGGCATGTCCAGGTGGAGATACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCAGAACTAGTGGACGCAATTGTTAAGAGCGTTCTTAATTTATCAGTTTTGTCTGCTACTAATTTTCCAGTTGGATTACAGTCCCACGTGGAAGATGTGATTCGAACTATAAAAAATAAATCCACGGAAGTTTGTACGATAGGGATATGTGGAATGGAAGGATCTGGTAAAACCACCATTGCCAAAGCCATCTACAACCATATTCATGGCACATTCAAGGAAAAAAGTTTCATTGAAGATATTGCGCGAGTTAGTCGAACCAAAGGGTATGCTCATTTACAAGGACAACTTCTGTCGGATATCCTTAAATCAAAGGTGGAGATACATAGCGTTGAGATGGGAAGACGTATGCTTCAGCAAAGGCTTCTTGGTAAAAGGGTGTTGATTGTACTTGACAATATAGATGAGAAAGCTCCATTATTAGATCTTTGGAGAAATCATGCATGGTTCAATAAAGGAACTGTAATAATAATTACAACAGCACATGAACACCTACTAAGGACGAGGATAGCTCAAGATGATTCTATTTTTCGGATAAACGTAATGAACGAAAATGAGTCGCTTGAGCTTCTTAGCTGGCACGCATTTAGAGAAGCAAAACCAAAAGCAGAATACGACGACCTTGCAAAGGAAGTAGTTGCTTATTGTGGAGGACTACCTCTGGCTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAGGTGGAAAGTGTCACTATTAGAGAAAATTCCCATAGCCTATGTTACGAAGATTCTAAAGAGCTGTGGAGTAGATGCTGATAATGGAATAAGATTTCTCATAGATCGTAACCTCATCAAAGCTAAAAGGAACAACAAACTTACAATGCATCCTTTGTTACAAGACATGGGAAGAGAAATTGTTCATAAATTTATACAAGAGGAAGTTTGGATGAAGAGTCCACGGTTTGATCATTCATATGTATTGACAAATAATACAGGGAAGAAATCCTCTAGGGAATTGCCTGTGAAACTTCTGTCATCCATAAGAGAACCATCAGGACTGCTGAAACTCGCTCAAAATTCTGAGTGTCGCTCTAAGAAATTGAGATGGATGAGTTTGCAAGGGTTTTCTTCAAAAAATCTATCTATCGACTTTGATCTGAATGATGCAATAGCAATTGATTTAAAACGCAGTCTTCTTCGACTCGTCTGGAAACAACCCCAGTTTTTAATGTGGCTAAAAGTTCTTAATCTTAGTCACTCCAAGAATTTAACACAAACCCCTGACTTTATCGGACTACCACGTCTTGAACGTCTCATTCTCAAAGATTGTCCACGATTGCACGAACTGCACCATTCTATTGGATTTCTCAGAAATCTTATACTGCTAAATCTGAAGGACTGTACAGGTCTAAGATATCTCCCTAAGGAGATAAGGAAGTTGAAATCTTTAAAATCTCTCATTCTTTCTGGTTGTTTGAAGATTCTCCTATTGGAAAAAGATATGATGCAAATGAAATCCCTGATAACTCTAGTTGCTGAGAATAAACCTATGAAACAAGTGCCTTTTTCAATTGTAAACTCAGAAAGCATTGGATATATATCCCTACGTCGATTTGAGGGATTGTTACGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAACAATGAATCCCATATCTTATATTCATTCAATGTGCATGGATATCGATAATAGTTGGGATGATATTGAACCATTGCATGGCAGCCTCAAAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTCCAACTATCTAAACAAGTACAAAATATTCTGGTAGAATATTTTGCATCTATTATAGAACCAGAAATTTCAAAGCAACAACTCAGGTGTTCTTTGATTGGTGTCGGAGCATACGATGAATTCTTCAATGTTTTCAGCGATAACATACCTAAGGATTTGGCATACAGTGAGTGGTGTGATGTTTCTCTCCCAGTTGTCAATGAAACTTATTGGTTGGCCCATATGGGTGAGGGACATTCTGTTTCCTTCACAGTGCCCGAGAATCGTGTCATGAAGGGAATGGCTTTGTGTGTGTTTTATTTATCAACCTCTGAAATCGTGGCAGCTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCATATACACAACAATGACACAATCATATCCTTTAATGATATAGATTGGCAGGGTATAAAGTCTAATTTAGGATCTGGAGACAAGGTGGAGATTTTTCTGACTTTTGCTCATGGATTGCTTGTGAAGAACACAATTTTCTATTCTATATGCGCGGAATAA 2799 0.3873 MESASSSFQHQRMYDVLINFAGEDIQRKFVSHLDSVLTSVGISTFLHHQNAVKEMYTEEPILNMCQVVIVVFTKTYSQSAWCLHQLQQIIQWHETYRRHVLPVYYEIQPSDVRLQKGDFGKAFTETAHQTFSGKQLEHGMSRWRYALTKAANFFGWDESNHRSDAELVDAIVKSVLNLSVLSATNFPVGLQSHVEDVIRTIKNKSTEVCTIGICGMEGSGKTTIAKAIYNHIHGTFKEKSFIEDIARVSRTKGYAHLQGQLLSDILKSKVEIHSVEMGRRMLQQRLLGKRVLIVLDNIDEKAPLLDLWRNHAWFNKGTVIIITTAHEHLLRTRIAQDDSIFRINVMNENESLELLSWHAFREAKPKAEYDDLAKEVVAYCGGLPLALEVIGSSLFERTKEEWRWKVSLLEKIPIAYVTKILKSCGVDADNGIRFLIDRNLIKAKRNNKLTMHPLLQDMGREIVHKFIQEEVWMKSPRFDHSYVLTNNTGKKSSRELPVKLLSSIREPSGLLKLAQNSECRSKKLRWMSLQGFSSKNLSIDFDLNDAIAIDLKRSLLRLVWKQPQFLMWLKVLNLSHSKNLTQTPDFIGLPRLERLILKDCPRLHELHHSIGFLRNLILLNLKDCTGLRYLPKEIRKLKSLKSLILSGCLKILLLEKDMMQMKSLITLVAENKPMKQVPFSIVNSESIGYISLRRFEGLLRNLFPSIIRSWMSPTMNPISYIHSMCMDIDNSWDDIEPLHGSLKNLRSVLVQCDTEFQLSKQVQNILVEYFASIIEPEISKQQLRCSLIGVGAYDEFFNVFSDNIPKDLAYSEWCDVSLPVVNETYWLAHMGEGHSVSFTVPENRVMKGMALCVFYLSTSEIVAAECLRSVLIVNYTKCTLHIHNNDTIISFNDIDWQGIKSNLGSGDKVEIFLTFAHGLLVKNTIFYSICAE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00574 932 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00574 932 Gene3D - 7 175 IPR035897 -
Viun10g00574 932 Gene3D - 176 338 IPR027417 -
Viun10g00574 932 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00574 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 422 IPR027417 -
Viun10g00574 932 PRINTS Disease resistance protein signature 380 394 - -
Viun10g00574 932 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00574 932 PRINTS Disease resistance protein signature 635 651 - -
Viun10g00574 932 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00574 932 Gene3D - 345 424 IPR042197 -
Viun10g00574 932 Gene3D Ribonuclease Inhibitor 505 779 IPR032675 -
Viun10g00574 932 SUPERFAMILY L domain-like 519 695 - -
Viun10g00574 932 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 671 IPR044974 GO:0006952
Viun10g00574 932 Pfam NB-ARC domain 191 413 IPR002182 GO:0043531
Viun10g00574 932 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00574 932 Pfam TIR domain 14 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00574 Viun-Chr10 5291919 5295599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00574 8 724 WRKY Transcription Factor Family AT4G12020 24.908 2.35e-47 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00574 - - vun:114165880 1180.24