Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00568 ATGGAATCTCCGTCTTCATCATCCAAATCCCAACCTATGTACGATGTCCTCATCAACTTTACCGGAGACGACATCCGTAGGAAATTTGTTTCTCATCTCGATTCTGCTCTCTCCTCTGTTGGATTCACCACTTTCCTTCATCACAATAATGCAGTGCCAGTGACGCCAAAACACATCCAAGAACCTATTCTGAATAATTGTCGGGTAGCAATAGTTGTTTTCACCACAACCTACTCTCAATCCGCTTGGTGCCTTCATCAGCTTCAACAAATCATCAAATGGCATGAAACTTATTGCCGACAATTTCTGCCGGTATACTACGAAATTCAGCCGTCTGATGTACGTCTTCAGAAGGGTCATTTTGGAAAATCTTTCAAAGCAACTGCACAACAAACATTTTCAGCACAACAATTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTGAGAAAAGCTGCAGATTTCTTTGGATGGGATGAGAGCAATTATAGGAGTGATGCTGAACTAGTGGAGGAAATTGTTAAAAGCGTTCTTAATTTACCAGTCTTGTCCGCTACTAAATTTCCCGTTGGATTACAATCCCAAGTGGAAGATGTGATTCAAACTATCAAAAATAAATCTGCAGAAGTTTGTACGATAGCGATATGTGGGATGGAAGGATCTGGTAAAACCACCATTGCCAAAGCCATCTACCATCAAATTCATGATAGATTCAAGCAGAAAAGTTTCGTTGAAGATATTGCACAAGTTAGTCAAACGAGAGGGTATGTTCATTTACAAGAACAACTTCTTTCAGAAGTGTTAAAAACAAAGGTGGAGATACATAGCGTTGAGATGGGAACAAGTATGATTCGGGCAAGGCTTCTTCGAAAAAGGGTGTTGATTGTACTTGACAATATAAATGACTATGATCCATTATTAGACCTATGGGAAAATCGTGCATGGTTCGATAAAGGAACTGTAATAATAATTACAACAAGACATGAACACCTACTGGGGATACGTCGTGTTGATTCTATTTTTCGGATAAATCTTTTGAACTCAAATCAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAGATGAAGAATACAATTTTCTTGCAAGAAGAATAGTTGCTTATTGTGGAGGACTGCCTCTAGTTCTTGAAGTCATTGGAAGTTGTTTATTTGAAAGGACGAAAGAAGAATGGAATAATGTATTGTTTAAATTAGCGAAAATTCCCCAGAACGATGTTCAACAGAAATTGAAGATAAGCTACGACTATTTACACAATCACTTGGAAAAGGACTTATTCCTTGATGTATGCTGTCTCTTTGTTGGTAAGGGTAGGGCCTATGCTGTGAAGATCCTATATGGCTGTGGGGTAGACGCTGATAGTGGAATAAGAGTTCTCATACAACGTAACCTCATAAAAGTTAAAAAAAACAACAAATTTGGAATGCATCCTTTGCTACACGAAATGGGAAGAAAAATTGTTCGTGATTTTGAAATTGGGAAGAACAGTCGACGGGGCATTGAAGAGGAAGCGGAATATGTATTACTGTCAGATAATAGAAGGACAGAAGCCATCGAGGGATATTGTCTGAAATTGTGTTCAGCCAGAAGAGATTGCTTCGAACAACTGGCTGTAAATTCTGAGTACCTTTCTCCGAAATTGAGATGGATCAGTTTGCATGGGTTTTCTTCAGAATACCTACATAACTTTTATTTGCATGAGGTAGTAGCGATTGATTTGAAACGAAGTCTTCTCCGACTAGTCTGGAAAGAACCCCAGGTTTTGAGGTCATTAAAAGTCCTTAACCTTAGTCACTCCGTGTACTTGACAGAAACACCTGACTTTTCACGACTACCTAATCTTGAACAGCTCATTCTAAAAGATTGTTCCAGATTGCATGAAATACATCATTCTATTGGATGTCTATGTAACCTTACACTACTAAATTTGAAAGACTGTATAAGTCTAAGCAATCTCCCGGAAGAGATATATAAGTTGAAATCTTTGAGAACTCTCATTCTCTCCGGTTGTTCGAAGATTGACCTAAGAGAAACAGATATAGTGCAAATGAAATCATTGATAACTCTGATATCAGAAAATATAGCTGTGAAACAAGTGCCCTTGTCAATTGTAAGCTCAGAAAGCATGGGATATATATCTCTACTTGGTTTTGAGAGATTGACAGATAATATTTTTCCTTCTATCCTTCGTTATTGGATGGTGCCAACAATGAATCCCATATCTTATATTCATTCGTTTTGCATGGATATGGAGCATAATAGTTGGGACGATATCGTGCCATTGCTTAGCAGCCTAGAAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCAAAGCAAGTAAAAAATATTATGGTCGACTATTTTGCAAATATTACAGAATCTGGAATTTCAAAGGAGCACTTAAGGTTTTCTTTGATTGGTGTTGGAAGATACAATGAATTCTTCAATGCTGCCAACGATATCTTATCTGAGGTAAGCAGTGAGTTGTGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTGAGGGACGTTCTGTATCTTTTACTGTCCCTCAAAATCGTGACCTGAAGGGTATGGCTTTGTGTGTTTTTTATTTATCAACCCCTAAAATCATTGAACCAGAATTTACTACTGTCTTAATTGTTAATTACACGAAGTGCACATTGCATATGCACAAGCATGACACAGTAATCTCCTTTAACGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATCTGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGTTAATCAAGAACACAGCTATCTATCTAATATTTGATGAATCAAATAACATGAAGAAAATGCTTGAGAAAAAGAAATTTTCACTCTTTAGATTTATAAAAAAAAATTGTAATTCGAGTTCTAGTAAGATATTGTCGAGAATATTTGTTTAA 3000 0.3773 MESPSSSSKSQPMYDVLINFTGDDIRRKFVSHLDSALSSVGFTTFLHHNNAVPVTPKHIQEPILNNCRVAIVVFTTTYSQSAWCLHQLQQIIKWHETYCRQFLPVYYEIQPSDVRLQKGHFGKSFKATAQQTFSAQQLEHGMSRWSHALRKAADFFGWDESNYRSDAELVEEIVKSVLNLPVLSATKFPVGLQSQVEDVIQTIKNKSAEVCTIAICGMEGSGKTTIAKAIYHQIHDRFKQKSFVEDIAQVSQTRGYVHLQEQLLSEVLKTKVEIHSVEMGTSMIRARLLRKRVLIVLDNINDYDPLLDLWENRAWFDKGTVIIITTRHEHLLGIRRVDSIFRINLLNSNQSLELLSWHAFREAKPDEEYNFLARRIVAYCGGLPLVLEVIGSCLFERTKEEWNNVLFKLAKIPQNDVQQKLKISYDYLHNHLEKDLFLDVCCLFVGKGRAYAVKILYGCGVDADSGIRVLIQRNLIKVKKNNKFGMHPLLHEMGRKIVRDFEIGKNSRRGIEEEAEYVLLSDNRRTEAIEGYCLKLCSARRDCFEQLAVNSEYLSPKLRWISLHGFSSEYLHNFYLHEVVAIDLKRSLLRLVWKEPQVLRSLKVLNLSHSVYLTETPDFSRLPNLEQLILKDCSRLHEIHHSIGCLCNLTLLNLKDCISLSNLPEEIYKLKSLRTLILSGCSKIDLRETDIVQMKSLITLISENIAVKQVPLSIVSSESMGYISLLGFERLTDNIFPSILRYWMVPTMNPISYIHSFCMDMEHNSWDDIVPLLSSLENLRSVLVQCDTEFQLSKQVKNIMVDYFANITESGISKEHLRFSLIGVGRYNEFFNAANDILSEVSSELCDVSLPGDNDPYWLAHMGEGRSVSFTVPQNRDLKGMALCVFYLSTPKIIEPEFTTVLIVNYTKCTLHMHKHDTVISFNDEDWHGIMSNLGSGDKVEIFVSFGHGLLIKNTAIYLIFDESNNMKKMLEKKKFSLFRFIKKNCNSSSSKILSRIFV 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00568 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 697 IPR044974 GO:0006952
Viun10g00568 999 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 158 IPR035897 -
Viun10g00568 999 Pfam TIR domain 14 182 IPR000157 GO:0007165
Viun10g00568 999 ProSiteProfiles TIR domain profile. 12 181 IPR000157 GO:0007165
Viun10g00568 999 Gene3D - 345 429 IPR042197 -
Viun10g00568 999 PRINTS Disease resistance protein signature 668 684 - -
Viun10g00568 999 PRINTS Disease resistance protein signature 212 227 - -
Viun10g00568 999 PRINTS Disease resistance protein signature 287 301 - -
Viun10g00568 999 PRINTS Disease resistance protein signature 380 394 - -
Viun10g00568 999 Gene3D Ribonuclease Inhibitor 520 700 IPR032675 -
Viun10g00568 999 SMART till_3 13 155 IPR000157 GO:0007165
Viun10g00568 999 SMART AAA_5 209 347 IPR003593 GO:0016887
Viun10g00568 999 SUPERFAMILY L domain-like 549 780 - -
Viun10g00568 999 Pfam NB-ARC domain 194 430 IPR002182 GO:0043531
Viun10g00568 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 439 IPR027417 -
Viun10g00568 999 Gene3D - 179 336 IPR027417 -
Viun10g00568 999 Gene3D - 6 178 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00568 Viun-Chr10 5257107 5260971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00568 6 684 WRKY Transcription Factor Family AT4G12020 28.611 1.60e-63 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00568 - - vun:114165880 1298.49