Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00567 ATGGAATCAGCGTCTTCATCATTAAAACACCAACGGATGTACGATGTGCTCATCAACTTTGCTGGAGAAGACATCCGAAGAAAATTTGTTTCTCATCTCGACTCTGTCCTCACTTCTGTTGGAATCTCCACTTTCCTTCACCACCAGAATGCAGTGAAGGAAATGTATATCGAAGAACCTATTTTGAATATGTGTCAGGTAGTAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCCTGGTGTCTTCATCAACTTCAACAAATCATTCAATGGCACGAAACCTATCGTCGACATGTTCTGCCGGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCACAGCAACTGCTCACCAAACGTTCTCAGGAAAACAACTGGAGCATGGCATGTCCAGGTGGAGATACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGACGCAGAACTAGTGGACACAATTGTTAAGAGCGTTCTTAATTTATCAGTCTTGTCTGCTACTAATTTTCCAGTTGGATTACAATCCCACGTGGAAGATGTGATTCGAACTATAAAAAAGAAATCAACGGAAGTTTGTACGATAGGGATATGTGGAATGGAAGGATCTGGTAAAACCACCATTGCCAAAGCCATCTACAACCATATTCATGGCACATTCAAGGAAAAAAGTTTCATTGAAGATATTGCGCAAGTTAGTCGAACCAGAGGGTATGCTCATTTACAAGGAAAACTTCTGTCGGATATCCTTAAAACAAAGGTGGAGATACATAGCGTTGAGATGGGAAGAAGTATGCTTCAGCAAAGGCTTCTTGGTAAAAGGGTGTTGATTGTACTTGACAATATAGATGAGAAAGCTCCATTATTAGATCTTTGGAGAAATCATGCATGGTTCAATAAAGGAACTGTAATAATAATTACAACAGCACATGAACACCTACTGAGGACGAGGACGCCTCTAGATGATTCTATTTTTCGGATAAATATAATGAACGCAAGCGAGTCCCTTGAATTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGCAGAATACGACGACCTTGCAAAGGAAGTAGTTGCGTATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTAGTTTATTTCAAAGCACGAAAGAAGAATGGAAGTGGGTAGTGTCAAAATTAGAGAAAATTCCCATGTATGATGTTCAACAGAAATTGAAAATAATCTTTGGAGGTTTACATAATGAACTGGAAATTGATTTATTTCTAGACGTATGTTGTTCCTTTGTTGGTAAGGACAGAGCCTATGTTACGAAGATTCTAAAGAGCTGTGGAGTAGATGCTGATAATGGAATAAGAGTTCTCATAGATCGTAACCTCATAAAAGTTAAAAGGAACAACAAACTTACAATGCATCCTTTGTTACAAAACATGGGAAGAGAAAGTTTTAATAAATTTATACAAGAGGAATTTTGGACGAAGAGTCTACGGTTTTATGATTCATATGTATTGACAAATAATACAGGGAAGAAATCCTCTAAGGAATTGCCTGTGAAACTTTTGTCAGTCAGAAGAAAACTATCAGGATTGCTGAAACTCGCTCAAAATTCTGAGTTTCGTTATAAGAAAGTGAGATGGATGAGTTTGCAAGGGTTTTCTTCAAAAAATCTATCTATCGACTTTGATATGAAAGATGCAATAGCAATTGATTTAAAACGCAGTCTTCTTCGACTCGTCTGGAAACAACCCCAGATTTTGAGGTGGCTAAAAGTCCTCAATCTTAGCCACTCCAGGTACTTGAAAAAAACCCCTGACTTTATCGGACTACCACATCTTGAACAACTCATTCTCAGAGATTGTCCAAGATTGCTCGAAGTGCACCAATCTATTGGATTTCTCTACAATCTTACACTCCTAAATTTGAAGGACTGTACAAGTCTAACCAATCTCCCTAGAGAGATATATAAGTTGAAATCCTTAAAAGCTCTCATTCTCTCAGGGTGTTCGATGATTGACCTATTGGAAAAAGATATAGTGCAAATGAAATCCTTGATAACTCTAATCACTGAAAATACAACCGTGAAAGAAGTGCCTTTTTCAATTGTAAACTCAGAAAGCATTGGATATATATCCCTACGTCGATTTGAGGGATTGTTACGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCATATCTTATATTCATTCGTTGTACATGGATATCGATAACACATGGGATGACATTGCGCCATTGCTTGGCAGCCTCAAAAATCTTCGAAGTGTTTTGGTGGAATGTGACACCGAGTTTCAACTATCTAAACAAGTACAAAATATTCTGGTGGAATACTTTGCAAATATTATAGAACCAGAAATTTCAAAGCAACAACTCAGGTGGTCTTTGATTGGTGTTGGAGCATACCATGAATTCTTCAATGTTTTCAGCGATAACATACCTAAGGATTTGGCATGCATCGAGTGGTGTGATGTTTCTCTCCCAGTTGTGAATGATACTTATTGGTTGGCCCAGATGGGTGAGGGACATTCTGTTTCTTTCACAGTGCCCGAGAATCGTGTCATGAAGGGAATTGCTTTGTGTGTATTTTATTTATCAACCTCTGAAATCGTGGCAGCTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCATATACACAACAATGACACAATCATATCCTTTAATGATATAGATTGGCAGGGTATAAAGTCTAATTTAGGATCTGGAGACAAGGTGGAGATTTTTCTGACTTTTGCTCATGGATTGCTTGTAAAGAACACAATTGTCTATTCTATATGCGCGGAATAA 2904 0.3812 MESASSSLKHQRMYDVLINFAGEDIRRKFVSHLDSVLTSVGISTFLHHQNAVKEMYIEEPILNMCQVVIVVFTKTYSQSAWCLHQLQQIIQWHETYRRHVLPVYYEIQPSDVRLQKGDFGKAFTATAHQTFSGKQLEHGMSRWRYALTKAANFFGWDESNHRSDAELVDTIVKSVLNLSVLSATNFPVGLQSHVEDVIRTIKKKSTEVCTIGICGMEGSGKTTIAKAIYNHIHGTFKEKSFIEDIAQVSRTRGYAHLQGKLLSDILKTKVEIHSVEMGRSMLQQRLLGKRVLIVLDNIDEKAPLLDLWRNHAWFNKGTVIIITTAHEHLLRTRTPLDDSIFRINIMNASESLEFLSWHAFREAKPKAEYDDLAKEVVAYCGGLPLALEVIGSSLFQSTKEEWKWVVSKLEKIPMYDVQQKLKIIFGGLHNELEIDLFLDVCCSFVGKDRAYVTKILKSCGVDADNGIRVLIDRNLIKVKRNNKLTMHPLLQNMGRESFNKFIQEEFWTKSLRFYDSYVLTNNTGKKSSKELPVKLLSVRRKLSGLLKLAQNSEFRYKKVRWMSLQGFSSKNLSIDFDMKDAIAIDLKRSLLRLVWKQPQILRWLKVLNLSHSRYLKKTPDFIGLPHLEQLILRDCPRLLEVHQSIGFLYNLTLLNLKDCTSLTNLPREIYKLKSLKALILSGCSMIDLLEKDIVQMKSLITLITENTTVKEVPFSIVNSESIGYISLRRFEGLLRNLFPSIIRSWMSPTMNPISYIHSLYMDIDNTWDDIAPLLGSLKNLRSVLVECDTEFQLSKQVQNILVEYFANIIEPEISKQQLRWSLIGVGAYHEFFNVFSDNIPKDLACIEWCDVSLPVVNDTYWLAQMGEGHSVSFTVPENRVMKGIALCVFYLSTSEIVAAECLRSVLIVNYTKCTLHIHNNDTIISFNDIDWQGIKSNLGSGDKVEIFLTFAHGLLVKNTIVYSICAE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00567 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 432 IPR027417 -
Viun10g00567 967 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00567 967 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00567 967 Gene3D Ribonuclease Inhibitor 532 822 IPR032675 -
Viun10g00567 967 Pfam TIR domain 14 180 IPR000157 GO:0007165
Viun10g00567 967 Gene3D - 176 335 IPR027417 -
Viun10g00567 967 SUPERFAMILY L domain-like 546 783 - -
Viun10g00567 967 Pfam NB-ARC domain 191 414 IPR002182 GO:0043531
Viun10g00567 967 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00567 967 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00567 967 PRINTS Disease resistance protein signature 670 686 - -
Viun10g00567 967 PRINTS Disease resistance protein signature 380 394 - -
Viun10g00567 967 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00567 967 Gene3D - 7 175 IPR035897 -
Viun10g00567 967 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 699 IPR044974 GO:0006952
Viun10g00567 967 Gene3D - 346 429 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00567 Viun-Chr10 5233642 5237373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00567 14 718 WRKY Transcription Factor Family AT4G12020 26.344 4.88e-52 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00567 - - vun:114165880 1283.09