Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00565 ATGGAATTCGCATCTTCATCATCCAAACTCCCACGGAAGTACGATGTGCTCATCAACTTCGATGGGGAAGAAATAGGCAGGAAATTTGTTTCTCATCTCGATTCTGTTCTCTCTGCTGTTGGACTCACCACTCTCCTTCATTACGACAATGCAGTGAAGTCAACGCACATCCAACAACCGATTCTCAATCTGTGTCGGATAGTAATAGTTGTTTTCACCAAAACATATTCTGAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCGAATGGCACCAAACTTATTGCCGACATGTTCTGCCTGTATATTATGAAATTCAGCCCTCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAGGCCTTCAAAGCAACTGCACAACGAACATTTTCAGAACAGGAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTAACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGAACTAGTGGACAAAATAGTTAAGAGCATTCTTAATTTATCAGCTTTGTCTGCTACTAAATTCCCAGTTGGATTACAAGACCGAGTGGAATTACTAATTCTAGCTATAAACAATAAGTCCAAGGAAGTTTGTACAATAGGGATATGTGGAATGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCCATCTACCATCAAATTCATGGTAGATTCATGCAGAAAAGTTTCATTGAAGATATTGCACAAGTTAGTGAACCAAGAGGGCGTATTCATTTACAGGAACAACTTCTTTCAGATATCCTAAACACAAAGGTGGAGATACATAGCGTTGAGATGGGAAGAAATATGATTCGGGACAGACTTTTTCAGAAAAGGGTGCTCATTGTACTTGATGATATGGATGACTATCTTCCATTATTAGATCTAAGGAAAAGTCGTTCATGGTTAAGTGAAGGAACTGTCATAATCATGACAACAAGAGACGAAGACCTACTGAGGAAACATCAAGTTGATTCTGTTTTTCGGACAAATCTAATGAATGAAAAGGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAGAAGAATACGATTACCTTGCAAGAAGAGTAATTTCTTGTTGTGGAGGACTGCCTCTAGCTCTTGAAGTCATTGGAAGTACTTTATTTGAAAGGACAGAAGAGGAATGGCATAGTATATTGTTTGAATTAGAGGAAACACCCATGTACGATGTTCAACTGAAATTGAAAATAAGCTTGGGTGGTTTACGCAATCAAATGGAAAGAGATTTATTCCTTGATGTATGCTGTTTCTTTGTTGGTAAAAACAGAGCCTATGCTACGAAGATCCTAAATGGCTCGGGAGTAGATGCTGATAGTGGAATAAGAGTTCTTATGGAGCGTAACCTCATTAAAGTTAAAAGGAATAACAAATTAGGAATGCATCCTTTGCTACAACAAATAGGAATAACAATTTTTCAACTAAATTCAACAGAAATACGACTGTTGTATGGTGATGTTATAGAATATGCCTTGAAGGTGAATACGTCACAGGGGAGAAAAGACTCTGAGCTATTGCCTGTGAGATTGCTTTCATCTATAAGAAAACCATCAAGACTGCCGAACGACGTTGAAAATTCTGAGAACCTTTCTCAGAAATTGAGATGGATTAGTTTGCATGGGTGTTCTTCAGAATACATACCTTTCGCCTTTAATGTCCACGATACAATAACGATTGATCTAAAACACAGTCTTCTTCGATTCTTTTGGGGAGAACCCCAGGTTTTGAGATCGCTAAAAGTACTTAACCTTAGTCACTCCATGTACTTGACAGAAACACCTGACTTTTCTAGACTACCAAGTCTTGAACAACTCATTCTAAAAGATTGTCCGAGATTACGCAAAGTACACAGATCTATTGGACATCTCTGTTATCTTATACTGCTTAATTTGAAGGACTGTAAATGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTGAAATCTTTAAGAACTCTTATCCTCTCTGGGTGTTCCAAGATTGGCCGAATGGGAAAAGATATAGTGCGAATGAAATCCTTGATAACTCTAATTGCTGAAAATACAGCAGTCAAACAAGTGCCCTTTTCAATTGTAACTTCAAAAGCTATTGGATATTTGTCCCTACCAGGATTTGAGAGATTGTCATGTAATCTTTTTCCTTCAATCATTATTCGGTCTTGGATGTCGCCAACAATGAATCCTGTATCCTATACTTATTCATTGAGCATGGATATAGATAATAGCTGGGATGATATTGTGCCATTGCTTGGTAGCTTGGCAAATCTTCGAAGTGTTTTGGTACAATGTGACACCGAGTTTCAGCTATCTAAGCAAGTACAAAACATTCTGGTCGAATATTTTTCAAATATTACAGAATCAAGAATTTCAAAGCAGCACTTTAGGTCTTCTTTGATTGGTGTTGGAGCATACTATGAATTCTTCAATGCTGTCAGCGGTAACATATCTGAGGTATTGGCAAGTAGGGAATCTTGTGATGTCTCTCTTCTAGGTGACAACCATCCTTATTGGTTAGCCTATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCCACATAATGATGTGAAAGGAATGATTTTGTGTGTTGTTTATTTATCAACCCTTGAAATTGAGGCAACTGAATGTCTTAGAAGCGTCTTAATTGTTAATTACACAAAGTGCACATTCCATATACACATGCATGGCACAGGAATTTCCTTTAATGATATTGATTGGGAAGGTATAATGTCAAACTTTGGATATGGAGACAAGGTGGAGATTTTTGTGACATTTGGTCATGGATTGGTGGTAAAGAACACATTTGTCTATCTTATATATGGTGAATCAAATTACTTGGAAAAAGAGCCTACACCACAGAAAAACTCTGTCCTTAGATTCATAAAGAAAATTGTAGAGTAA 2973 0.3821 MEFASSSSKLPRKYDVLINFDGEEIGRKFVSHLDSVLSAVGLTTLLHYDNAVKSTHIQQPILNLCRIVIVVFTKTYSESAWCLHQLQQIIEWHQTYCRHVLPVYYEIQPSDVRLQKGDFGKAFKATAQRTFSEQELEHGMSRWSHALTKAANFFGWDESNHRSDAELVDKIVKSILNLSALSATKFPVGLQDRVELLILAINNKSKEVCTIGICGMGGSGKTTLAKAIYHQIHGRFMQKSFIEDIAQVSEPRGRIHLQEQLLSDILNTKVEIHSVEMGRNMIRDRLFQKRVLIVLDDMDDYLPLLDLRKSRSWLSEGTVIIMTTRDEDLLRKHQVDSVFRTNLMNEKESLELLSWHAFREPKPKEEYDYLARRVISCCGGLPLALEVIGSTLFERTEEEWHSILFELEETPMYDVQLKLKISLGGLRNQMERDLFLDVCCFFVGKNRAYATKILNGSGVDADSGIRVLMERNLIKVKRNNKLGMHPLLQQIGITIFQLNSTEIRLLYGDVIEYALKVNTSQGRKDSELLPVRLLSSIRKPSRLPNDVENSENLSQKLRWISLHGCSSEYIPFAFNVHDTITIDLKHSLLRFFWGEPQVLRSLKVLNLSHSMYLTETPDFSRLPSLEQLILKDCPRLRKVHRSIGHLCYLILLNLKDCKCLSNLPREIYKLKSLRTLILSGCSKIGRMGKDIVRMKSLITLIAENTAVKQVPFSIVTSKAIGYLSLPGFERLSCNLFPSIIIRSWMSPTMNPVSYTYSLSMDIDNSWDDIVPLLGSLANLRSVLVQCDTEFQLSKQVQNILVEYFSNITESRISKQHFRSSLIGVGAYYEFFNAVSGNISEVLASRESCDVSLLGDNHPYWLAYMGEGDSVSFTVPPHNDVKGMILCVVYLSTLEIEATECLRSVLIVNYTKCTFHIHMHGTGISFNDIDWEGIMSNFGYGDKVEIFVTFGHGLVVKNTFVYLIYGESNYLEKEPTPQKNSVLRFIKKIVE 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00565 990 Gene3D - 177 338 IPR027417 -
Viun10g00565 990 SMART AAA_5 207 349 IPR003593 GO:0016887
Viun10g00565 990 Gene3D Ribonuclease Inhibitor 532 826 IPR032675 -
Viun10g00565 990 SUPERFAMILY L domain-like 555 729 - -
Viun10g00565 990 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00565 990 Gene3D - 343 426 IPR042197 -
Viun10g00565 990 PRINTS Disease resistance protein signature 668 684 - -
Viun10g00565 990 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00565 990 PRINTS Disease resistance protein signature 378 392 - -
Viun10g00565 990 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00565 990 Pfam TIR domain 13 177 IPR000157 GO:0007165
Viun10g00565 990 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00565 990 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00565 990 Gene3D - 7 176 IPR035897 -
Viun10g00565 990 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 690 IPR044974 GO:0006952
Viun10g00565 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 437 IPR027417 -
Viun10g00565 990 Pfam NB-ARC domain 203 418 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00565 Viun-Chr10 5187120 5191174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00565 12 714 WRKY Transcription Factor Family AT4G12020 26.146 3.57e-55 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00565 - - vun:114165880 1593.94