Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00564 ATGTTTTGCCCGTATATTACGAAATTTCGCCATCTGATATACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCGAAGCTACCGCACACCAAACCTTTTCAAGACAACAACTGGAGCATGGGATGTCTAGGTGGAGCCAAGCACTCACGAAAGCAGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGACAGAGCTTATGTTAGAGAGATTCTAAATGGCTGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGACCGTAACCTCATAAAACTTAAAAGAAACAACACATTCGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAAATCGATCACCGAAAAGGGGAAGAAAGATATGCATTGGAAGAGACTGATGTCTTTGCATCTGAGAGGGTAAGCGTCTTAGCGAGACGCCGTAAGAAACTATTTTTAACCAGAGCACTTTGCTTCAAACCTTATGCTCCAGTGATAAGACACAATTCAAGACTTCTGAAAATCGTCGGAAATCCTGAGTATCTTAGGTTGAATTCTTCAAAATTCCTACCTAATGACTTTTATCTGCATGGTGCAATATCGATTGATTTAAGCCACACTTCTCTTCGACTCGACTGGAAAAAATTGCAGGTTTGGGCGTCGCTAAAAGTCTTGAATCTTAGTCTCAAATCTTGCTCAAAATTGCGCAAAGTACATCGATCTATTGGATGTCTCTATGATCTTACACTGTTAAATTTGAAGGACTGTACACGTCTAAGCAATCTCCCCAAAGAGACATATAAGTTGAAATCTTTAAGAACTCTGATTCTCTCTGGTTGTTCCAAGATTGAACTAATGGAAAAGGATGTACTGCAAATGGAATCCTTGGTATCTCTAATTGCTGAAAATACAGCTGTGAAACAAGTACCTCTTTCAATTGTAAGATCAAAAAGCATCGGATATATATCCTTACATCGATTTGAGGGACTGCCACGTAATCTTTTTCCTTCCATCATTCGGTCTCGGATCTCACCAACAATGGATTCCCTGTCTTATGTTCATTCGTTCATGGATAAGAAGGATTATATTCAGGATGCTATTGCATCATTTCTTAGAATGCTTGTAAATCTTCGAAGTGTGTCCGTGGAATGTGACCCCGAGTTTGAACTATCTAAGGAAGTGAAAACAGTTCTGGTCGAATATTGTCCAAATATTACAGAATCAAGAATCTCAAAGCATCACTTAAGGTCTTCTTTCATTAGTGTCGGAAGATACAATGACTTCTTAAATACTGTATTGGCAATCAGTGAGTCGTGTGATGTTTCTCTCCCTGGTGACAATGATCCTTATTGGTTGGCCCATACAGGTGAGGGACATTCTGTTTCTTTCACTGTTCCTCAAGATCGTGTCATGAAGGGAATAGTTTTGAATGTTGTTTATTTATCAACCCCTGGAATCTTGACAACTGAATCCTTTACAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTACTGATGCACAACCATGACAGAGTAATTTCCTTTAATGCTGCATCGATATTTTGTTTCACACACATTTCATTATGA 1572 0.3887 MFCPYITKFRHLIYVFRRVILEKPSKLPHTKPFQDNNWSMGCLGGAKHSRKQQISLDGMRAITDRAYVREILNGCGVDADSGIRVLIDRNLIKLKRNNTFGMHPLLQEMGREIDHRKGEERYALEETDVFASERVSVLARRRKKLFLTRALCFKPYAPVIRHNSRLLKIVGNPEYLRLNSSKFLPNDFYLHGAISIDLSHTSLRLDWKKLQVWASLKVLNLSLKSCSKLRKVHRSIGCLYDLTLLNLKDCTRLSNLPKETYKLKSLRTLILSGCSKIELMEKDVLQMESLVSLIAENTAVKQVPLSIVRSKSIGYISLHRFEGLPRNLFPSIIRSRISPTMDSLSYVHSFMDKKDYIQDAIASFLRMLVNLRSVSVECDPEFELSKEVKTVLVEYCPNITESRISKHHLRSSFISVGRYNDFLNTVLAISESCDVSLPGDNDPYWLAHTGEGHSVSFTVPQDRVMKGIVLNVVYLSTPGILTTESFTSVLIVNYTKCTLLMHNHDRVISFNAASIFCFTHISL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00564 523 Gene3D Ribonuclease Inhibitor 165 436 IPR032675 -
Viun10g00564 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 340 IPR044974 GO:0006952
Viun10g00564 523 SUPERFAMILY L domain-like 176 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00564 Viun-Chr10 5157913 5166382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00564 67 309 WRKY Transcription Factor Family AT5G45050 26.263 1.49e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00564 - - vun:114165123 479.174